Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm44814-201ENSMUST00000207018 434 ntBASIC12.81□□□□□ -0.36
HttP42859 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
HttP42859 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HttP42859 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.81□□□□□ -0.36
HttP42859 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.81□□□□□ -0.36
HttP42859 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HttP42859 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HttP42859 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HttP42859 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HttP42859 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HttP42859 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.81□□□□□ -0.36
HttP42859 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HttP42859 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.81□□□□□ -0.36
HttP42859 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HttP42859 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.81□□□□□ -0.36
HttP42859 Gm12418-201ENSMUST00000118116 942 ntBASIC12.81□□□□□ -0.36
HttP42859 Gm13624-201ENSMUST00000120263 462 ntBASIC12.81□□□□□ -0.36
HttP42859 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.81□□□□□ -0.36
HttP42859 Rhox12-203ENSMUST00000183737 761 ntTSL 3 BASIC12.81□□□□□ -0.36
HttP42859 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC12.81□□□□□ -0.36
HttP42859 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC12.81□□□□□ -0.36
HttP42859 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
HttP42859 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HttP42859 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HttP42859 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
HttP42859 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HttP42859 Gm15519-201ENSMUST00000120088 1566 ntBASIC12.81□□□□□ -0.36
HttP42859 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HttP42859 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HttP42859 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HttP42859 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HttP42859 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
HttP42859 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HttP42859 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HttP42859 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.8□□□□□ -0.36
HttP42859 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HttP42859 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HttP42859 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
HttP42859 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HttP42859 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HttP42859 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
HttP42859 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HttP42859 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HttP42859 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HttP42859 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HttP42859 1700025C18Rik-201ENSMUST00000109304 702 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HttP42859 Gm15982-201ENSMUST00000121681 554 ntBASIC12.8□□□□□ -0.36
HttP42859 Rrm2b-207ENSMUST00000146821 420 ntTSL 5 BASIC12.8□□□□□ -0.36
HttP42859 Gm25394-201ENSMUST00000157338 133 ntBASIC12.8□□□□□ -0.36
HttP42859 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC12.8□□□□□ -0.36
HttP42859 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC12.8□□□□□ -0.36
HttP42859 Gm42655-201ENSMUST00000202782 1134 ntBASIC12.8□□□□□ -0.36
HttP42859 CT573047.1-201ENSMUST00000223652 851 ntBASIC12.8□□□□□ -0.36
HttP42859 CT010506.1-201ENSMUST00000223673 349 ntBASIC12.8□□□□□ -0.36
HttP42859 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
HttP42859 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
HttP42859 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.8□□□□□ -0.36
HttP42859 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
HttP42859 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HttP42859 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
HttP42859 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
HttP42859 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HttP42859 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
HttP42859 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HttP42859 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HttP42859 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
HttP42859 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.8□□□□□ -0.36
HttP42859 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HttP42859 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
HttP42859 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
HttP42859 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
HttP42859 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
HttP42859 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HttP42859 Gm25562-201ENSMUST00000104608 133 ntBASIC12.79□□□□□ -0.36
HttP42859 Gm14497-201ENSMUST00000119537 580 ntBASIC12.79□□□□□ -0.36
HttP42859 Gm13827-201ENSMUST00000148801 372 ntBASIC12.79□□□□□ -0.36
HttP42859 Gm6606-201ENSMUST00000193613 947 ntBASIC12.79□□□□□ -0.36
HttP42859 Gm37851-201ENSMUST00000193871 889 ntBASIC12.79□□□□□ -0.36
HttP42859 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC12.79□□□□□ -0.36
HttP42859 Izumo1r-202ENSMUST00000069408 1172 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HttP42859 n-R5s71-201ENSMUST00000093668 119 ntBASIC12.79□□□□□ -0.36
HttP42859 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
HttP42859 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HttP42859 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
HttP42859 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HttP42859 Smok4a-201ENSMUST00000074512 1455 ntBASIC12.79□□□□□ -0.36
HttP42859 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.79□□□□□ -0.36
HttP42859 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
HttP42859 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HttP42859 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HttP42859 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC12.79□□□□□ -0.36
HttP42859 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HttP42859 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HttP42859 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.79□□□□□ -0.36
HttP42859 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HttP42859 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HttP42859 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HttP42859 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HttP42859 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HttP42859 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms