Protein–RNA interactions for Protein: P42580

Nkx1-2, NK1 transcription factor-related protein 2, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-2P42580 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx1-2P42580 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx1-2P42580 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx1-2P42580 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx1-2P42580 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx1-2P42580 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx1-2P42580 Gm44260-201ENSMUST00000204946 2094 ntBASIC15.26■□□□□ 0.03
Nkx1-2P42580 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx1-2P42580 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx1-2P42580 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx1-2P42580 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx1-2P42580 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx1-2P42580 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx1-2P42580 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx1-2P42580 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx1-2P42580 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx1-2P42580 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx1-2P42580 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx1-2P42580 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx1-2P42580 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC15.25■□□□□ 0.03
Nkx1-2P42580 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Nkx1-2P42580 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx1-2P42580 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC15.25■□□□□ 0.03
Nkx1-2P42580 Gm11964-201ENSMUST00000120982 444 ntBASIC15.25■□□□□ 0.03
Nkx1-2P42580 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx1-2P42580 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC15.25■□□□□ 0.03
Nkx1-2P42580 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC15.25■□□□□ 0.03
Nkx1-2P42580 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx1-2P42580 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx1-2P42580 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Nkx1-2P42580 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx1-2P42580 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Nkx1-2P42580 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx1-2P42580 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx1-2P42580 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx1-2P42580 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx1-2P42580 Gm36987-201ENSMUST00000194704 2979 ntBASIC15.25■□□□□ 0.03
Nkx1-2P42580 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx1-2P42580 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx1-2P42580 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx1-2P42580 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx1-2P42580 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx1-2P42580 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx1-2P42580 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx1-2P42580 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx1-2P42580 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx1-2P42580 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC15.24■□□□□ 0.03
Nkx1-2P42580 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx1-2P42580 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx1-2P42580 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx1-2P42580 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx1-2P42580 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
Nkx1-2P42580 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC15.24■□□□□ 0.03
Nkx1-2P42580 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Nkx1-2P42580 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx1-2P42580 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC15.24■□□□□ 0.03
Nkx1-2P42580 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx1-2P42580 Gm12390-201ENSMUST00000117897 397 ntBASIC15.24■□□□□ 0.03
Nkx1-2P42580 Gm1335-201ENSMUST00000121653 386 ntBASIC15.24■□□□□ 0.03
Nkx1-2P42580 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC15.24■□□□□ 0.03
Nkx1-2P42580 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx1-2P42580 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC15.24■□□□□ 0.03
Nkx1-2P42580 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx1-2P42580 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
Nkx1-2P42580 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC15.24■□□□□ 0.03
Nkx1-2P42580 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC15.24■□□□□ 0.03
Nkx1-2P42580 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx1-2P42580 Gm10339-203ENSMUST00000225409 1671 ntBASIC15.24■□□□□ 0.03
Nkx1-2P42580 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx1-2P42580 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx1-2P42580 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx1-2P42580 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC15.24■□□□□ 0.03
Nkx1-2P42580 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx1-2P42580 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx1-2P42580 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx1-2P42580 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx1-2P42580 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx1-2P42580 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx1-2P42580 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC15.24■□□□□ 0.03
Nkx1-2P42580 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Nkx1-2P42580 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx1-2P42580 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx1-2P42580 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Nkx1-2P42580 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx1-2P42580 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx1-2P42580 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Nkx1-2P42580 Gm19692-201ENSMUST00000203856 2084 ntBASIC15.23■□□□□ 0.03
Nkx1-2P42580 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx1-2P42580 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx1-2P42580 Gm12384-201ENSMUST00000119228 919 ntBASIC15.23■□□□□ 0.03
Nkx1-2P42580 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Nkx1-2P42580 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx1-2P42580 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx1-2P42580 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC15.23■□□□□ 0.03
Nkx1-2P42580 AC098716.1-201ENSMUST00000213527 703 ntBASIC15.23■□□□□ 0.03
Nkx1-2P42580 AC122459.1-201ENSMUST00000228373 885 ntBASIC15.23■□□□□ 0.03
Nkx1-2P42580 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx1-2P42580 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx1-2P42580 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Nkx1-2P42580 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms