Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox6P40645 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sox6P40645 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.69□□□□□ -0.54
Sox6P40645 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox6P40645 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC11.69□□□□□ -0.54
Sox6P40645 Gm45684-201ENSMUST00000210244 1571 ntBASIC11.69□□□□□ -0.54
Sox6P40645 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.69□□□□□ -0.54
Sox6P40645 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.69□□□□□ -0.54
Sox6P40645 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sox6P40645 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Sox6P40645 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox6P40645 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Sox6P40645 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.69□□□□□ -0.54
Sox6P40645 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox6P40645 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox6P40645 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox6P40645 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox6P40645 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox6P40645 Zscan30-202ENSMUST00000224144 1458 ntBASIC11.69□□□□□ -0.54
Sox6P40645 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox6P40645 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC11.69□□□□□ -0.54
Sox6P40645 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox6P40645 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
Sox6P40645 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC11.68□□□□□ -0.54
Sox6P40645 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox6P40645 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC11.68□□□□□ -0.54
Sox6P40645 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.68□□□□□ -0.54
Sox6P40645 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox6P40645 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox6P40645 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox6P40645 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox6P40645 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox6P40645 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Sox6P40645 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox6P40645 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox6P40645 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC11.68□□□□□ -0.54
Sox6P40645 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox6P40645 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC11.68□□□□□ -0.54
Sox6P40645 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox6P40645 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sox6P40645 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox6P40645 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Sox6P40645 Gm38297-201ENSMUST00000195122 1057 ntBASIC11.68□□□□□ -0.54
Sox6P40645 Gm37497-201ENSMUST00000195830 798 ntBASIC11.68□□□□□ -0.54
Sox6P40645 Gm29705-201ENSMUST00000212598 474 ntBASIC11.68□□□□□ -0.54
Sox6P40645 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox6P40645 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox6P40645 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sox6P40645 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox6P40645 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sox6P40645 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox6P40645 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sox6P40645 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox6P40645 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox6P40645 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox6P40645 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox6P40645 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox6P40645 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Sox6P40645 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC11.67□□□□□ -0.54
Sox6P40645 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.67□□□□□ -0.54
Sox6P40645 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sox6P40645 AC101945.2-201ENSMUST00000227886 1377 ntBASIC11.67□□□□□ -0.54
Sox6P40645 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox6P40645 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sox6P40645 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox6P40645 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.67□□□□□ -0.54
Sox6P40645 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox6P40645 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox6P40645 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox6P40645 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox6P40645 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox6P40645 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Sox6P40645 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sox6P40645 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox6P40645 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Sox6P40645 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sox6P40645 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox6P40645 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sox6P40645 Gm12390-201ENSMUST00000117897 397 ntBASIC11.67□□□□□ -0.54
Sox6P40645 Gm13369-201ENSMUST00000119442 987 ntBASIC11.67□□□□□ -0.54
Sox6P40645 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC11.67□□□□□ -0.54
Sox6P40645 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC11.67□□□□□ -0.54
Sox6P40645 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC11.67□□□□□ -0.54
Sox6P40645 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sox6P40645 Gm27331-201ENSMUST00000183705 60 ntBASIC11.67□□□□□ -0.54
Sox6P40645 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sox6P40645 Gm28693-202ENSMUST00000190758 331 ntBASIC11.67□□□□□ -0.54
Sox6P40645 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC11.67□□□□□ -0.54
Sox6P40645 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox6P40645 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC11.67□□□□□ -0.54
Sox6P40645 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC11.67□□□□□ -0.54
Sox6P40645 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox6P40645 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sox6P40645 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox6P40645 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox6P40645 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox6P40645 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sox6P40645 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sox6P40645 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.67□□□□□ -0.54
Sox6P40645 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms