Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Gm10339-203ENSMUST00000225409 1671 ntBASIC13.55□□□□□ -0.24
Sox5P35710 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox5P35710 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox5P35710 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox5P35710 CT573086.2-201ENSMUST00000227277 4992 ntBASIC13.55□□□□□ -0.24
Sox5P35710 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sox5P35710 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox5P35710 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox5P35710 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC13.55□□□□□ -0.24
Sox5P35710 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox5P35710 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox5P35710 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sox5P35710 Gm37827-201ENSMUST00000194486 1542 ntBASIC13.54□□□□□ -0.24
Sox5P35710 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sox5P35710 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sox5P35710 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox5P35710 Gm19692-201ENSMUST00000203856 2084 ntBASIC13.54□□□□□ -0.24
Sox5P35710 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox5P35710 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox5P35710 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox5P35710 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sox5P35710 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sox5P35710 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox5P35710 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Sox5P35710 Gm27892-201ENSMUST00000185017 106 ntBASIC13.54□□□□□ -0.24
Sox5P35710 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sox5P35710 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sox5P35710 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.54□□□□□ -0.24
Sox5P35710 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox5P35710 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox5P35710 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox5P35710 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox5P35710 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sox5P35710 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sox5P35710 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox5P35710 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sox5P35710 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox5P35710 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox5P35710 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox5P35710 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox5P35710 AC160410.1-201ENSMUST00000219298 1972 ntBASIC13.54□□□□□ -0.24
Sox5P35710 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox5P35710 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox5P35710 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sox5P35710 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox5P35710 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sox5P35710 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox5P35710 Gm9279-201ENSMUST00000223175 1606 ntBASIC13.53□□□□□ -0.24
Sox5P35710 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox5P35710 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Sox5P35710 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox5P35710 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC13.53□□□□□ -0.24
Sox5P35710 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox5P35710 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox5P35710 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Sox5P35710 Gm37105-201ENSMUST00000192251 2085 ntBASIC13.53□□□□□ -0.24
Sox5P35710 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox5P35710 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC13.53□□□□□ -0.24
Sox5P35710 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC13.53□□□□□ -0.24
Sox5P35710 Gm12138-201ENSMUST00000122180 951 ntBASIC13.53□□□□□ -0.24
Sox5P35710 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC13.53□□□□□ -0.24
Sox5P35710 Gm24644-201ENSMUST00000157114 139 ntBASIC13.53□□□□□ -0.24
Sox5P35710 Gm23119-201ENSMUST00000158610 140 ntBASIC13.53□□□□□ -0.24
Sox5P35710 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC13.53□□□□□ -0.24
Sox5P35710 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox5P35710 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox5P35710 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sox5P35710 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox5P35710 Gm18636-201ENSMUST00000218846 1066 ntBASIC13.53□□□□□ -0.24
Sox5P35710 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC13.53□□□□□ -0.24
Sox5P35710 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox5P35710 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox5P35710 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC13.53□□□□□ -0.24
Sox5P35710 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox5P35710 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sox5P35710 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox5P35710 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox5P35710 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Sox5P35710 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sox5P35710 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox5P35710 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC13.53□□□□□ -0.24
Sox5P35710 AC154639.1-201ENSMUST00000224393 2849 ntBASIC13.53□□□□□ -0.24
Sox5P35710 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sox5P35710 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Sox5P35710 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox5P35710 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox5P35710 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox5P35710 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Sox5P35710 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sox5P35710 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Sox5P35710 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sox5P35710 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sox5P35710 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Sox5P35710 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Sox5P35710 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Sox5P35710 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Sox5P35710 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sox5P35710 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sox5P35710 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Sox5P35710 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms