Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Mmp13P33435 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Mmp13P33435 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mmp13P33435 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mmp13P33435 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mmp13P33435 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Mmp13P33435 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Mmp13P33435 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mmp13P33435 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Mmp13P33435 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Mmp13P33435 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Mmp13P33435 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Mmp13P33435 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Mmp13P33435 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Mmp13P33435 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
Mmp13P33435 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Mmp13P33435 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.71□□□□□ -0.37
Mmp13P33435 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Mmp13P33435 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Mmp13P33435 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Mmp13P33435 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Mmp13P33435 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.71□□□□□ -0.37
Mmp13P33435 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Mmp13P33435 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Mmp13P33435 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.71□□□□□ -0.37
Mmp13P33435 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.71□□□□□ -0.37
Mmp13P33435 Mir1938-201ENSMUST00000158746 100 ntBASIC12.71□□□□□ -0.37
Mmp13P33435 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.71□□□□□ -0.37
Mmp13P33435 Gm26927-201ENSMUST00000182385 965 ntBASIC12.71□□□□□ -0.37
Mmp13P33435 Gm27572-201ENSMUST00000183702 255 ntBASIC12.71□□□□□ -0.37
Mmp13P33435 Gm43630-201ENSMUST00000201550 776 ntBASIC12.71□□□□□ -0.37
Mmp13P33435 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.71□□□□□ -0.37
Mmp13P33435 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.71□□□□□ -0.37
Mmp13P33435 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Mmp13P33435 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Mmp13P33435 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.71□□□□□ -0.37
Mmp13P33435 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Mmp13P33435 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Mmp13P33435 Gm10478-201ENSMUST00000084451 396 ntBASIC12.71□□□□□ -0.37
Mmp13P33435 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Mmp13P33435 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Mmp13P33435 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Mmp13P33435 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Mmp13P33435 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Mmp13P33435 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.71□□□□□ -0.38
Mmp13P33435 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.71□□□□□ -0.38
Mmp13P33435 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Mmp13P33435 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Mmp13P33435 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Mmp13P33435 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Mmp13P33435 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Mmp13P33435 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Mmp13P33435 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mmp13P33435 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mmp13P33435 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mmp13P33435 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
Mmp13P33435 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mmp13P33435 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Mmp13P33435 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mmp13P33435 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mmp13P33435 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Mmp13P33435 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.7□□□□□ -0.38
Mmp13P33435 Gm11637-201ENSMUST00000120601 592 ntBASIC12.7□□□□□ -0.38
Mmp13P33435 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Mmp13P33435 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Mmp13P33435 Gm7029-201ENSMUST00000173226 450 ntBASIC12.7□□□□□ -0.38
Mmp13P33435 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Mmp13P33435 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mmp13P33435 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mmp13P33435 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Mmp13P33435 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Mmp13P33435 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mmp13P33435 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mmp13P33435 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Mmp13P33435 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mmp13P33435 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.7□□□□□ -0.38
Mmp13P33435 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mmp13P33435 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Mmp13P33435 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Mmp13P33435 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.7□□□□□ -0.38
Mmp13P33435 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.7□□□□□ -0.38
Mmp13P33435 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mmp13P33435 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mmp13P33435 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.7□□□□□ -0.38
Mmp13P33435 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Mmp13P33435 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Mmp13P33435 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Mmp13P33435 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Mmp13P33435 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.69□□□□□ -0.38
Mmp13P33435 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Mmp13P33435 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Mmp13P33435 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Mmp13P33435 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.69□□□□□ -0.38
Mmp13P33435 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.69□□□□□ -0.38
Mmp13P33435 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Mmp13P33435 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Mmp13P33435 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Mmp13P33435 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Mmp13P33435 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Mmp13P33435 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms