Protein–RNA interactions for Protein: P32043

Hoxc5, Homeobox protein Hox-C5, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc5P32043 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxc5P32043 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxc5P32043 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxc5P32043 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.53□□□□□ -0.56
Hoxc5P32043 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC11.53□□□□□ -0.56
Hoxc5P32043 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxc5P32043 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Hoxc5P32043 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
Hoxc5P32043 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Hoxc5P32043 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Hoxc5P32043 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Hoxc5P32043 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Hoxc5P32043 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Hoxc5P32043 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Hoxc5P32043 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.52□□□□□ -0.56
Hoxc5P32043 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxc5P32043 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxc5P32043 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxc5P32043 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxc5P32043 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxc5P32043 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxc5P32043 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxc5P32043 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxc5P32043 Gm1335-201ENSMUST00000121653 386 ntBASIC11.52□□□□□ -0.57
Hoxc5P32043 Gm14760-201ENSMUST00000121831 999 ntBASIC11.52□□□□□ -0.57
Hoxc5P32043 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxc5P32043 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.52□□□□□ -0.57
Hoxc5P32043 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.52□□□□□ -0.57
Hoxc5P32043 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxc5P32043 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC11.52□□□□□ -0.57
Hoxc5P32043 Gm27682-201ENSMUST00000183930 110 ntBASIC11.52□□□□□ -0.57
Hoxc5P32043 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxc5P32043 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxc5P32043 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.52□□□□□ -0.57
Hoxc5P32043 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
Hoxc5P32043 Gm45484-201ENSMUST00000210310 1141 ntBASIC11.52□□□□□ -0.57
Hoxc5P32043 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC11.52□□□□□ -0.57
Hoxc5P32043 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxc5P32043 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.52□□□□□ -0.57
Hoxc5P32043 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.52□□□□□ -0.57
Hoxc5P32043 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxc5P32043 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxc5P32043 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Hoxc5P32043 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxc5P32043 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxc5P32043 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxc5P32043 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Hoxc5P32043 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Hoxc5P32043 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.52□□□□□ -0.57
Hoxc5P32043 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Hoxc5P32043 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxc5P32043 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Hoxc5P32043 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxc5P32043 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxc5P32043 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.52□□□□□ -0.57
Hoxc5P32043 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxc5P32043 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxc5P32043 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Hoxc5P32043 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxc5P32043 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.52□□□□□ -0.57
Hoxc5P32043 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Hoxc5P32043 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Hoxc5P32043 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxc5P32043 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.52□□□□□ -0.57
Hoxc5P32043 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxc5P32043 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxc5P32043 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.51□□□□□ -0.57
Hoxc5P32043 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Hoxc5P32043 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxc5P32043 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.51□□□□□ -0.57
Hoxc5P32043 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxc5P32043 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxc5P32043 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxc5P32043 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxc5P32043 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxc5P32043 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxc5P32043 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxc5P32043 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Hoxc5P32043 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxc5P32043 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC11.51□□□□□ -0.57
Hoxc5P32043 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxc5P32043 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Hoxc5P32043 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxc5P32043 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.51□□□□□ -0.57
Hoxc5P32043 Gm29127-201ENSMUST00000188304 517 ntBASIC11.51□□□□□ -0.57
Hoxc5P32043 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC11.51□□□□□ -0.57
Hoxc5P32043 Arhgef33-209ENSMUST00000225223 714 ntBASIC11.51□□□□□ -0.57
Hoxc5P32043 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.51□□□□□ -0.57
Hoxc5P32043 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxc5P32043 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxc5P32043 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Hoxc5P32043 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxc5P32043 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Hoxc5P32043 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxc5P32043 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxc5P32043 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxc5P32043 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.51□□□□□ -0.57
Hoxc5P32043 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxc5P32043 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxc5P32043 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms