Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Gm9550-201ENSMUST00000161130 862 ntBASIC14.22□□□□□ -0.13
Vcam1P29533 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC14.22□□□□□ -0.13
Vcam1P29533 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Vcam1P29533 Gm37246-201ENSMUST00000192665 835 ntBASIC14.22□□□□□ -0.13
Vcam1P29533 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC14.22□□□□□ -0.13
Vcam1P29533 Gm18556-201ENSMUST00000219748 1031 ntBASIC14.22□□□□□ -0.13
Vcam1P29533 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC14.22□□□□□ -0.13
Vcam1P29533 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vcam1P29533 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vcam1P29533 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vcam1P29533 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vcam1P29533 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Vcam1P29533 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Vcam1P29533 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vcam1P29533 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Vcam1P29533 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vcam1P29533 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vcam1P29533 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Vcam1P29533 Gm37644-201ENSMUST00000192190 2270 ntBASIC14.22□□□□□ -0.13
Vcam1P29533 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC14.22□□□□□ -0.13
Vcam1P29533 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vcam1P29533 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vcam1P29533 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vcam1P29533 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.22□□□□□ -0.13
Vcam1P29533 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vcam1P29533 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC14.22□□□□□ -0.13
Vcam1P29533 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vcam1P29533 Gm37131-201ENSMUST00000192502 1561 ntBASIC14.22□□□□□ -0.13
Vcam1P29533 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC14.21□□□□□ -0.13
Vcam1P29533 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vcam1P29533 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Vcam1P29533 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vcam1P29533 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vcam1P29533 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Vcam1P29533 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vcam1P29533 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vcam1P29533 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vcam1P29533 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vcam1P29533 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Vcam1P29533 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC14.21□□□□□ -0.13
Vcam1P29533 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Vcam1P29533 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Vcam1P29533 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
Vcam1P29533 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC14.21□□□□□ -0.13
Vcam1P29533 Gm1821-202ENSMUST00000227415 750 ntBASIC14.21□□□□□ -0.13
Vcam1P29533 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vcam1P29533 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Vcam1P29533 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vcam1P29533 Gm7002-201ENSMUST00000221386 2165 ntBASIC14.21□□□□□ -0.13
Vcam1P29533 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Vcam1P29533 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vcam1P29533 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vcam1P29533 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.21□□□□□ -0.14
Vcam1P29533 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Vcam1P29533 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Vcam1P29533 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Vcam1P29533 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Vcam1P29533 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vcam1P29533 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vcam1P29533 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Vcam1P29533 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vcam1P29533 Gm37513-201ENSMUST00000194830 2268 ntBASIC14.2□□□□□ -0.14
Vcam1P29533 Gm38378-201ENSMUST00000195153 2268 ntBASIC14.2□□□□□ -0.14
Vcam1P29533 Gm12857-201ENSMUST00000117678 592 ntBASIC14.2□□□□□ -0.14
Vcam1P29533 Gm12616-201ENSMUST00000118594 382 ntBASIC14.2□□□□□ -0.14
Vcam1P29533 Gm8566-201ENSMUST00000120174 465 ntBASIC14.2□□□□□ -0.14
Vcam1P29533 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC14.2□□□□□ -0.14
Vcam1P29533 Gm10051-201ENSMUST00000145209 414 ntBASIC14.2□□□□□ -0.14
Vcam1P29533 Gm12624-201ENSMUST00000177615 382 ntBASIC14.2□□□□□ -0.14
Vcam1P29533 Gm12621-201ENSMUST00000177760 382 ntBASIC14.2□□□□□ -0.14
Vcam1P29533 Gm12615-201ENSMUST00000177970 382 ntBASIC14.2□□□□□ -0.14
Vcam1P29533 Gm12622-201ENSMUST00000177975 382 ntBASIC14.2□□□□□ -0.14
Vcam1P29533 Gm9630-201ENSMUST00000178304 885 ntBASIC14.2□□□□□ -0.14
Vcam1P29533 Gm12627-201ENSMUST00000178412 382 ntBASIC14.2□□□□□ -0.14
Vcam1P29533 Gm12625-201ENSMUST00000179122 382 ntBASIC14.2□□□□□ -0.14
Vcam1P29533 Gm12614-201ENSMUST00000179586 382 ntBASIC14.2□□□□□ -0.14
Vcam1P29533 Gm12613-201ENSMUST00000180323 382 ntBASIC14.2□□□□□ -0.14
Vcam1P29533 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Vcam1P29533 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vcam1P29533 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vcam1P29533 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vcam1P29533 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Vcam1P29533 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vcam1P29533 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC14.2□□□□□ -0.14
Vcam1P29533 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Vcam1P29533 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC14.2□□□□□ -0.14
Vcam1P29533 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Vcam1P29533 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Vcam1P29533 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC14.2□□□□□ -0.14
Vcam1P29533 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vcam1P29533 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vcam1P29533 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vcam1P29533 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vcam1P29533 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vcam1P29533 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vcam1P29533 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vcam1P29533 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vcam1P29533 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Vcam1P29533 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vcam1P29533 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms