Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col2a1P28481 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col2a1P28481 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col2a1P28481 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col2a1P28481 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col2a1P28481 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col2a1P28481 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col2a1P28481 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col2a1P28481 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col2a1P28481 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col2a1P28481 Gm22144-201ENSMUST00000157402 102 ntBASIC13.92□□□□□ -0.18
Col2a1P28481 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Col2a1P28481 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col2a1P28481 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col2a1P28481 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col2a1P28481 AC122408.1-201ENSMUST00000218949 218 ntBASIC13.92□□□□□ -0.18
Col2a1P28481 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col2a1P28481 Gm5537-201ENSMUST00000091117 1252 ntBASIC13.92□□□□□ -0.18
Col2a1P28481 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC13.92□□□□□ -0.18
Col2a1P28481 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col2a1P28481 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col2a1P28481 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col2a1P28481 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.92□□□□□ -0.18
Col2a1P28481 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col2a1P28481 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col2a1P28481 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.92□□□□□ -0.18
Col2a1P28481 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC13.91□□□□□ -0.18
Col2a1P28481 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col2a1P28481 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col2a1P28481 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col2a1P28481 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC13.91□□□□□ -0.18
Col2a1P28481 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Col2a1P28481 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col2a1P28481 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col2a1P28481 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.91□□□□□ -0.18
Col2a1P28481 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Col2a1P28481 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col2a1P28481 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Col2a1P28481 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Col2a1P28481 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC13.91□□□□□ -0.18
Col2a1P28481 Gm29499-201ENSMUST00000189151 486 ntBASIC13.91□□□□□ -0.18
Col2a1P28481 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col2a1P28481 Gm28329-201ENSMUST00000191208 689 ntBASIC13.91□□□□□ -0.18
Col2a1P28481 Gm29171-201ENSMUST00000191397 486 ntBASIC13.91□□□□□ -0.18
Col2a1P28481 Gm44551-201ENSMUST00000208804 171 ntBASIC13.91□□□□□ -0.18
Col2a1P28481 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC13.91□□□□□ -0.18
Col2a1P28481 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col2a1P28481 Gm9387-201ENSMUST00000098624 1320 ntBASIC13.91□□□□□ -0.18
Col2a1P28481 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col2a1P28481 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col2a1P28481 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col2a1P28481 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col2a1P28481 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col2a1P28481 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Col2a1P28481 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col2a1P28481 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col2a1P28481 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Col2a1P28481 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col2a1P28481 Adra1a-206ENSMUST00000225182 2337 ntBASIC13.9□□□□□ -0.18
Col2a1P28481 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col2a1P28481 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col2a1P28481 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
Col2a1P28481 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col2a1P28481 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col2a1P28481 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col2a1P28481 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col2a1P28481 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.9□□□□□ -0.18
Col2a1P28481 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col2a1P28481 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Col2a1P28481 Gm15172-201ENSMUST00000118945 1046 ntBASIC13.9□□□□□ -0.18
Col2a1P28481 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Col2a1P28481 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC13.9□□□□□ -0.18
Col2a1P28481 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC13.9□□□□□ -0.18
Col2a1P28481 Gm44270-201ENSMUST00000203084 1234 ntBASIC13.9□□□□□ -0.18
Col2a1P28481 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Col2a1P28481 Gm17831-201ENSMUST00000205579 900 ntBASIC13.9□□□□□ -0.18
Col2a1P28481 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col2a1P28481 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col2a1P28481 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC13.9□□□□□ -0.18
Col2a1P28481 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Col2a1P28481 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC13.9□□□□□ -0.18
Col2a1P28481 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col2a1P28481 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Col2a1P28481 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col2a1P28481 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Col2a1P28481 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Col2a1P28481 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col2a1P28481 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Col2a1P28481 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Col2a1P28481 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Col2a1P28481 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col2a1P28481 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Col2a1P28481 Gm9129-201ENSMUST00000218173 1689 ntBASIC13.9□□□□□ -0.18
Col2a1P28481 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Col2a1P28481 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Col2a1P28481 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col2a1P28481 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Col2a1P28481 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col2a1P28481 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Col2a1P28481 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms