Protein–RNA interactions for Protein: P24549

Aldh1a1, Retinal dehydrogenase 1, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aldh1a1P24549 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Aldh1a1P24549 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Aldh1a1P24549 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Aldh1a1P24549 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Aldh1a1P24549 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.4□□□□□ -0.26
Aldh1a1P24549 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Aldh1a1P24549 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Aldh1a1P24549 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
Aldh1a1P24549 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Aldh1a1P24549 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
Aldh1a1P24549 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Aldh1a1P24549 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Aldh1a1P24549 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Aldh1a1P24549 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Aldh1a1P24549 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Aldh1a1P24549 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Aldh1a1P24549 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Aldh1a1P24549 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.27
Aldh1a1P24549 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.27
Aldh1a1P24549 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Aldh1a1P24549 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.27
Aldh1a1P24549 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Aldh1a1P24549 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Aldh1a1P24549 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.39□□□□□ -0.27
Aldh1a1P24549 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Aldh1a1P24549 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Aldh1a1P24549 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.39□□□□□ -0.27
Aldh1a1P24549 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Aldh1a1P24549 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Aldh1a1P24549 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Aldh1a1P24549 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.39□□□□□ -0.27
Aldh1a1P24549 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Aldh1a1P24549 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Aldh1a1P24549 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Aldh1a1P24549 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Aldh1a1P24549 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Aldh1a1P24549 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Aldh1a1P24549 Gm15904-201ENSMUST00000154515 487 ntTSL 3 BASIC13.39□□□□□ -0.27
Aldh1a1P24549 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Aldh1a1P24549 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Aldh1a1P24549 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Aldh1a1P24549 Gm8343-201ENSMUST00000182705 994 ntBASIC13.39□□□□□ -0.27
Aldh1a1P24549 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Aldh1a1P24549 Gm38210-201ENSMUST00000191944 809 ntBASIC13.39□□□□□ -0.27
Aldh1a1P24549 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Aldh1a1P24549 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC13.39□□□□□ -0.27
Aldh1a1P24549 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC13.39□□□□□ -0.27
Aldh1a1P24549 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC13.39□□□□□ -0.27
Aldh1a1P24549 AC154305.4-201ENSMUST00000224520 614 ntBASIC13.39□□□□□ -0.27
Aldh1a1P24549 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Aldh1a1P24549 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Aldh1a1P24549 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Aldh1a1P24549 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Aldh1a1P24549 Gm10288-201ENSMUST00000084614 537 ntBASIC13.39□□□□□ -0.27
Aldh1a1P24549 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Aldh1a1P24549 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
Aldh1a1P24549 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Aldh1a1P24549 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Aldh1a1P24549 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Aldh1a1P24549 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Aldh1a1P24549 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Aldh1a1P24549 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Aldh1a1P24549 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Aldh1a1P24549 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Aldh1a1P24549 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Aldh1a1P24549 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Aldh1a1P24549 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Aldh1a1P24549 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Aldh1a1P24549 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Aldh1a1P24549 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Aldh1a1P24549 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Aldh1a1P24549 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Aldh1a1P24549 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Aldh1a1P24549 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Aldh1a1P24549 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Aldh1a1P24549 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Aldh1a1P24549 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
Aldh1a1P24549 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Aldh1a1P24549 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Aldh1a1P24549 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Aldh1a1P24549 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Aldh1a1P24549 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Aldh1a1P24549 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Aldh1a1P24549 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Aldh1a1P24549 Gm13809-201ENSMUST00000117921 597 ntBASIC13.38□□□□□ -0.27
Aldh1a1P24549 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Aldh1a1P24549 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC13.38□□□□□ -0.27
Aldh1a1P24549 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC13.38□□□□□ -0.27
Aldh1a1P24549 Gm28324-201ENSMUST00000187913 264 ntBASIC13.38□□□□□ -0.27
Aldh1a1P24549 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC13.38□□□□□ -0.27
Aldh1a1P24549 Gm9463-201ENSMUST00000206707 601 ntBASIC13.38□□□□□ -0.27
Aldh1a1P24549 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Aldh1a1P24549 Gm45909-201ENSMUST00000212413 1031 ntBASIC13.38□□□□□ -0.27
Aldh1a1P24549 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC13.38□□□□□ -0.27
Aldh1a1P24549 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC13.38□□□□□ -0.27
Aldh1a1P24549 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Aldh1a1P24549 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Aldh1a1P24549 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Aldh1a1P24549 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Aldh1a1P24549 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms