Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
Smim1P0C8K7 Gm37969-201ENSMUST00000195777 3409 ntBASIC8.5□□□□□ -1.05
Smim1P0C8K7 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC8.49□□□□□ -1.05
Smim1P0C8K7 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Smim1P0C8K7 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC8.49□□□□□ -1.05
Smim1P0C8K7 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Smim1P0C8K7 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC8.49□□□□□ -1.05
Smim1P0C8K7 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC8.49□□□□□ -1.05
Smim1P0C8K7 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Smim1P0C8K7 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Smim1P0C8K7 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Smim1P0C8K7 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Smim1P0C8K7 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
Smim1P0C8K7 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
Smim1P0C8K7 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Smim1P0C8K7 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Smim1P0C8K7 AC154171.2-201ENSMUST00000225219 2652 ntBASIC8.49□□□□□ -1.05
Smim1P0C8K7 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
Smim1P0C8K7 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Smim1P0C8K7 Gm37422-201ENSMUST00000193794 4718 ntBASIC8.49□□□□□ -1.05
Smim1P0C8K7 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Smim1P0C8K7 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC8.49□□□□□ -1.05
Smim1P0C8K7 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Smim1P0C8K7 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Smim1P0C8K7 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC8.49□□□□□ -1.05
Smim1P0C8K7 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Smim1P0C8K7 Retreg1-206ENSMUST00000228306 1430 ntBASIC8.49□□□□□ -1.05
Smim1P0C8K7 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
Smim1P0C8K7 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Smim1P0C8K7 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC8.49□□□□□ -1.05
Smim1P0C8K7 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Smim1P0C8K7 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC8.49□□□□□ -1.05
Smim1P0C8K7 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Smim1P0C8K7 Gm27459-201ENSMUST00000184860 107 ntBASIC8.49□□□□□ -1.05
Smim1P0C8K7 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC8.49□□□□□ -1.05
Smim1P0C8K7 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC8.49□□□□□ -1.05
Smim1P0C8K7 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC8.49□□□□□ -1.05
Smim1P0C8K7 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
Smim1P0C8K7 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC8.49□□□□□ -1.05
Smim1P0C8K7 Gm7229-201ENSMUST00000214719 1007 ntBASIC8.49□□□□□ -1.05
Smim1P0C8K7 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Smim1P0C8K7 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Smim1P0C8K7 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Smim1P0C8K7 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Smim1P0C8K7 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Smim1P0C8K7 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Smim1P0C8K7 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Smim1P0C8K7 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Smim1P0C8K7 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Smim1P0C8K7 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
Smim1P0C8K7 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Smim1P0C8K7 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC8.49□□□□□ -1.05
Smim1P0C8K7 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
Smim1P0C8K7 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Smim1P0C8K7 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
Smim1P0C8K7 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Smim1P0C8K7 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Smim1P0C8K7 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Smim1P0C8K7 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Smim1P0C8K7 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Smim1P0C8K7 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC8.49□□□□□ -1.05
Smim1P0C8K7 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Smim1P0C8K7 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Smim1P0C8K7 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Smim1P0C8K7 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Smim1P0C8K7 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Smim1P0C8K7 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Smim1P0C8K7 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Smim1P0C8K7 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Smim1P0C8K7 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.05
Smim1P0C8K7 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Smim1P0C8K7 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Smim1P0C8K7 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Smim1P0C8K7 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Smim1P0C8K7 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC8.48□□□□□ -1.05
Smim1P0C8K7 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC8.48□□□□□ -1.05
Smim1P0C8K7 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Smim1P0C8K7 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Smim1P0C8K7 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Smim1P0C8K7 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Smim1P0C8K7 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Smim1P0C8K7 AC108858.2-201ENSMUST00000228186 1425 ntBASIC8.48□□□□□ -1.05
Smim1P0C8K7 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Smim1P0C8K7 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Smim1P0C8K7 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Smim1P0C8K7 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Smim1P0C8K7 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.05
Smim1P0C8K7 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Smim1P0C8K7 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Smim1P0C8K7 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC8.48□□□□□ -1.05
Smim1P0C8K7 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
Smim1P0C8K7 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
Smim1P0C8K7 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC8.48□□□□□ -1.05
Smim1P0C8K7 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Smim1P0C8K7 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Smim1P0C8K7 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Smim1P0C8K7 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
Smim1P0C8K7 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC8.48□□□□□ -1.05
Smim1P0C8K7 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
Smim1P0C8K7 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC8.48□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms