Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC18.43■□□□□ 0.54
NclP09405 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC18.43■□□□□ 0.54
NclP09405 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NclP09405 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
NclP09405 Gm9996-201ENSMUST00000070359 913 ntBASIC18.43■□□□□ 0.54
NclP09405 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
NclP09405 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NclP09405 Gm13142-201ENSMUST00000117213 1453 ntBASIC18.43■□□□□ 0.54
NclP09405 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NclP09405 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NclP09405 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NclP09405 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NclP09405 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
NclP09405 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NclP09405 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NclP09405 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NclP09405 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC18.43■□□□□ 0.54
NclP09405 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NclP09405 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NclP09405 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NclP09405 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NclP09405 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
NclP09405 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC18.42■□□□□ 0.54
NclP09405 Gm45342-201ENSMUST00000210903 1363 ntBASIC18.42■□□□□ 0.54
NclP09405 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NclP09405 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC18.42■□□□□ 0.54
NclP09405 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
NclP09405 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
NclP09405 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NclP09405 Gm3052-202ENSMUST00000188254 2224 ntBASIC18.42■□□□□ 0.54
NclP09405 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
NclP09405 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
NclP09405 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NclP09405 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NclP09405 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NclP09405 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NclP09405 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NclP09405 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NclP09405 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC18.42■□□□□ 0.54
NclP09405 Mir5120-201ENSMUST00000175020 78 ntBASIC18.42■□□□□ 0.54
NclP09405 Gm28450-201ENSMUST00000187349 638 ntBASIC18.42■□□□□ 0.54
NclP09405 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC18.42■□□□□ 0.54
NclP09405 Gm17812-201ENSMUST00000204935 318 ntBASIC18.42■□□□□ 0.54
NclP09405 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC18.42■□□□□ 0.54
NclP09405 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC18.42■□□□□ 0.54
NclP09405 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC18.42■□□□□ 0.54
NclP09405 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NclP09405 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NclP09405 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC18.42■□□□□ 0.54
NclP09405 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
NclP09405 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NclP09405 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC18.42■□□□□ 0.54
NclP09405 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NclP09405 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
NclP09405 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NclP09405 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
NclP09405 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
NclP09405 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NclP09405 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NclP09405 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NclP09405 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NclP09405 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NclP09405 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NclP09405 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
NclP09405 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NclP09405 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
NclP09405 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
NclP09405 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NclP09405 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC18.41■□□□□ 0.54
NclP09405 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NclP09405 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
NclP09405 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC18.41■□□□□ 0.54
NclP09405 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC18.41■□□□□ 0.54
NclP09405 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC18.41■□□□□ 0.54
NclP09405 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NclP09405 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NclP09405 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NclP09405 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
NclP09405 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NclP09405 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
NclP09405 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC18.41■□□□□ 0.54
NclP09405 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC18.41■□□□□ 0.54
NclP09405 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NclP09405 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC18.41■□□□□ 0.54
NclP09405 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NclP09405 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NclP09405 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NclP09405 AC116503.1-201ENSMUST00000215445 2192 ntBASIC18.41■□□□□ 0.54
NclP09405 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NclP09405 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
NclP09405 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NclP09405 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NclP09405 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NclP09405 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NclP09405 Gm43289-201ENSMUST00000200537 1475 ntBASIC18.4■□□□□ 0.54
NclP09405 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NclP09405 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
NclP09405 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NclP09405 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NclP09405 Gm12286-201ENSMUST00000119246 1002 ntBASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms