Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 AC154848.1-201ENSMUST00000225451 846 ntBASIC12.5□□□□□ -0.41
Hoxb3P09026 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.5□□□□□ -0.41
Hoxb3P09026 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxb3P09026 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxb3P09026 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxb3P09026 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxb3P09026 Olfr851-201ENSMUST00000064582 939 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Hoxb3P09026 Tas2r113-201ENSMUST00000079035 930 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Hoxb3P09026 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxb3P09026 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxb3P09026 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxb3P09026 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxb3P09026 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxb3P09026 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxb3P09026 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxb3P09026 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxb3P09026 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxb3P09026 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.5□□□□□ -0.41
Hoxb3P09026 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxb3P09026 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxb3P09026 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxb3P09026 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxb3P09026 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxb3P09026 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxb3P09026 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxb3P09026 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Hoxb3P09026 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Hoxb3P09026 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Hoxb3P09026 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxb3P09026 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Hoxb3P09026 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxb3P09026 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Hoxb3P09026 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxb3P09026 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxb3P09026 Gm6170-201ENSMUST00000187672 1388 ntBASIC12.49□□□□□ -0.41
Hoxb3P09026 C730045M19Rik-201ENSMUST00000201944 1315 ntBASIC12.49□□□□□ -0.41
Hoxb3P09026 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Hoxb3P09026 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC12.49□□□□□ -0.41
Hoxb3P09026 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Hoxb3P09026 Gm12165-201ENSMUST00000117047 342 ntBASIC12.49□□□□□ -0.41
Hoxb3P09026 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC12.49□□□□□ -0.41
Hoxb3P09026 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC12.49□□□□□ -0.41
Hoxb3P09026 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxb3P09026 Tsc22d1-207ENSMUST00000140251 670 ntTSL 2 BASIC12.49□□□□□ -0.41
Hoxb3P09026 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.49□□□□□ -0.41
Hoxb3P09026 Gm12111-201ENSMUST00000150073 349 ntTSL 3 BASIC12.49□□□□□ -0.41
Hoxb3P09026 Gm25043-201ENSMUST00000158604 212 ntBASIC12.49□□□□□ -0.41
Hoxb3P09026 Scgb2a2-201ENSMUST00000179814 1107 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Hoxb3P09026 2810049E08Rik-201ENSMUST00000185600 1102 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxb3P09026 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.49□□□□□ -0.41
Hoxb3P09026 Gm21190-202ENSMUST00000196384 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxb3P09026 Gm21149-201ENSMUST00000197995 1212 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Hoxb3P09026 Gm43124-201ENSMUST00000201878 278 ntBASIC12.49□□□□□ -0.41
Hoxb3P09026 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC12.49□□□□□ -0.41
Hoxb3P09026 Gm45120-201ENSMUST00000208880 408 ntBASIC12.49□□□□□ -0.41
Hoxb3P09026 4930550C14Rik-204ENSMUST00000217318 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxb3P09026 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxb3P09026 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxb3P09026 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxb3P09026 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Hoxb3P09026 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxb3P09026 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxb3P09026 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxb3P09026 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxb3P09026 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Hoxb3P09026 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.49□□□□□ -0.41
Hoxb3P09026 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxb3P09026 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxb3P09026 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxb3P09026 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxb3P09026 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Hoxb3P09026 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxb3P09026 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.48□□□□□ -0.41
Hoxb3P09026 AC137950.2-202ENSMUST00000227150 1635 ntBASIC12.48□□□□□ -0.41
Hoxb3P09026 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxb3P09026 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxb3P09026 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxb3P09026 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxb3P09026 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxb3P09026 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Hoxb3P09026 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxb3P09026 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.48□□□□□ -0.41
Hoxb3P09026 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxb3P09026 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxb3P09026 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxb3P09026 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Hoxb3P09026 Gm1330-202ENSMUST00000109942 555 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Hoxb3P09026 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC12.48□□□□□ -0.41
Hoxb3P09026 Gm2044-201ENSMUST00000130771 911 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxb3P09026 Gm13658-201ENSMUST00000135329 929 ntTSL 5 BASIC12.48□□□□□ -0.41
Hoxb3P09026 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxb3P09026 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxb3P09026 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxb3P09026 Gm29011-201ENSMUST00000191059 712 ntBASIC12.48□□□□□ -0.41
Hoxb3P09026 Gm35216-201ENSMUST00000203777 433 ntTSL 2 BASIC12.48□□□□□ -0.41
Hoxb3P09026 Gm35713-201ENSMUST00000210516 199 ntBASIC12.48□□□□□ -0.41
Hoxb3P09026 CT485607.1-201ENSMUST00000216100 85 ntBASIC12.48□□□□□ -0.41
Hoxb3P09026 AC153529.1-201ENSMUST00000217818 370 ntBASIC12.48□□□□□ -0.41
Hoxb3P09026 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC12.48□□□□□ -0.41
Hoxb3P09026 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms