Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
ApoeP08226 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC11.75□□□□□ -0.53
ApoeP08226 Gm44882-201ENSMUST00000205702 802 ntBASIC11.75□□□□□ -0.53
ApoeP08226 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
ApoeP08226 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.75□□□□□ -0.53
ApoeP08226 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC11.75□□□□□ -0.53
ApoeP08226 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
ApoeP08226 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
ApoeP08226 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.75□□□□□ -0.53
ApoeP08226 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
ApoeP08226 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ApoeP08226 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ApoeP08226 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ApoeP08226 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ApoeP08226 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC11.75□□□□□ -0.53
ApoeP08226 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
ApoeP08226 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
ApoeP08226 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
ApoeP08226 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
ApoeP08226 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
ApoeP08226 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ApoeP08226 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
ApoeP08226 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
ApoeP08226 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ApoeP08226 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
ApoeP08226 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ApoeP08226 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
ApoeP08226 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.74□□□□□ -0.53
ApoeP08226 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
ApoeP08226 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ApoeP08226 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.74□□□□□ -0.53
ApoeP08226 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.74□□□□□ -0.53
ApoeP08226 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
ApoeP08226 Gm43172-201ENSMUST00000202139 2137 ntBASIC11.74□□□□□ -0.53
ApoeP08226 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
ApoeP08226 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ApoeP08226 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
ApoeP08226 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ApoeP08226 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
ApoeP08226 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC11.74□□□□□ -0.53
ApoeP08226 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
ApoeP08226 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
ApoeP08226 Gm28631-201ENSMUST00000190740 334 ntBASIC11.74□□□□□ -0.53
ApoeP08226 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC11.74□□□□□ -0.53
ApoeP08226 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ApoeP08226 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ApoeP08226 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
ApoeP08226 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC11.74□□□□□ -0.53
ApoeP08226 Gm24136-201ENSMUST00000083374 165 ntBASIC11.74□□□□□ -0.53
ApoeP08226 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
ApoeP08226 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
ApoeP08226 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ApoeP08226 Gm3365-201ENSMUST00000216296 1480 ntBASIC11.74□□□□□ -0.53
ApoeP08226 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
ApoeP08226 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ApoeP08226 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
ApoeP08226 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
ApoeP08226 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ApoeP08226 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ApoeP08226 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
ApoeP08226 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ApoeP08226 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
ApoeP08226 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ApoeP08226 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
ApoeP08226 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ApoeP08226 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
ApoeP08226 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
ApoeP08226 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
ApoeP08226 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
ApoeP08226 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ApoeP08226 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ApoeP08226 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ApoeP08226 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ApoeP08226 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ApoeP08226 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ApoeP08226 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ApoeP08226 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
ApoeP08226 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ApoeP08226 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
ApoeP08226 Gm8805-201ENSMUST00000117848 313 ntBASIC11.73□□□□□ -0.53
ApoeP08226 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC11.73□□□□□ -0.53
ApoeP08226 Gm11637-201ENSMUST00000120601 592 ntBASIC11.73□□□□□ -0.53
ApoeP08226 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
ApoeP08226 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
ApoeP08226 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
ApoeP08226 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ApoeP08226 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.73□□□□□ -0.53
ApoeP08226 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
ApoeP08226 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
ApoeP08226 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ApoeP08226 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC11.73□□□□□ -0.53
ApoeP08226 Gm37042-201ENSMUST00000193816 581 ntBASIC11.73□□□□□ -0.53
ApoeP08226 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ApoeP08226 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
ApoeP08226 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ApoeP08226 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
ApoeP08226 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
ApoeP08226 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
ApoeP08226 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
ApoeP08226 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms