Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hoxa3P02831 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Hoxa3P02831 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hoxa3P02831 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Hoxa3P02831 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hoxa3P02831 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hoxa3P02831 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hoxa3P02831 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Hoxa3P02831 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Hoxa3P02831 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Hoxa3P02831 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hoxa3P02831 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Hoxa3P02831 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Hoxa3P02831 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hoxa3P02831 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hoxa3P02831 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hoxa3P02831 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hoxa3P02831 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Hoxa3P02831 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC10.44□□□□□ -0.74
Hoxa3P02831 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hoxa3P02831 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC10.44□□□□□ -0.74
Hoxa3P02831 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Hoxa3P02831 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Hoxa3P02831 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hoxa3P02831 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC10.43□□□□□ -0.74
Hoxa3P02831 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hoxa3P02831 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC10.43□□□□□ -0.74
Hoxa3P02831 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hoxa3P02831 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hoxa3P02831 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hoxa3P02831 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hoxa3P02831 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hoxa3P02831 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Hoxa3P02831 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hoxa3P02831 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hoxa3P02831 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC10.43□□□□□ -0.74
Hoxa3P02831 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hoxa3P02831 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hoxa3P02831 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hoxa3P02831 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Hoxa3P02831 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Hoxa3P02831 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hoxa3P02831 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hoxa3P02831 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hoxa3P02831 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hoxa3P02831 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hoxa3P02831 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Hoxa3P02831 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Hoxa3P02831 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hoxa3P02831 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC10.43□□□□□ -0.74
Hoxa3P02831 Gm14921-201ENSMUST00000118643 908 ntBASIC10.43□□□□□ -0.74
Hoxa3P02831 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC10.43□□□□□ -0.74
Hoxa3P02831 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Hoxa3P02831 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Hoxa3P02831 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Hoxa3P02831 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Hoxa3P02831 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Hoxa3P02831 Gm29199-201ENSMUST00000187766 775 ntBASIC10.43□□□□□ -0.74
Hoxa3P02831 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Hoxa3P02831 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC10.43□□□□□ -0.74
Hoxa3P02831 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC10.43□□□□□ -0.74
Hoxa3P02831 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hoxa3P02831 AC166095.1-201ENSMUST00000223731 1241 ntBASIC10.43□□□□□ -0.74
Hoxa3P02831 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hoxa3P02831 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hoxa3P02831 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Hoxa3P02831 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hoxa3P02831 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hoxa3P02831 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Hoxa3P02831 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hoxa3P02831 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC10.43□□□□□ -0.74
Hoxa3P02831 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hoxa3P02831 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hoxa3P02831 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hoxa3P02831 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Hoxa3P02831 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Hoxa3P02831 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hoxa3P02831 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Hoxa3P02831 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hoxa3P02831 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hoxa3P02831 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Hoxa3P02831 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Hoxa3P02831 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Hoxa3P02831 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hoxa3P02831 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Hoxa3P02831 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Hoxa3P02831 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hoxa3P02831 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hoxa3P02831 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Hoxa3P02831 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hoxa3P02831 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Hoxa3P02831 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Hoxa3P02831 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC10.42□□□□□ -0.74
Hoxa3P02831 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hoxa3P02831 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC10.42□□□□□ -0.74
Hoxa3P02831 AC137842.1-201ENSMUST00000227896 2064 ntBASIC10.42□□□□□ -0.74
Hoxa3P02831 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hoxa3P02831 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hoxa3P02831 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hoxa3P02831 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms