Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vti1aO89116 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vti1aO89116 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.44□□□□□ -0.26
Vti1aO89116 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vti1aO89116 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vti1aO89116 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC13.44□□□□□ -0.26
Vti1aO89116 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Vti1aO89116 Gm25700-201ENSMUST00000177693 110 ntBASIC13.44□□□□□ -0.26
Vti1aO89116 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC13.44□□□□□ -0.26
Vti1aO89116 Gm27023-201ENSMUST00000182372 285 ntBASIC13.44□□□□□ -0.26
Vti1aO89116 Gm6652-201ENSMUST00000186414 1070 ntBASIC13.44□□□□□ -0.26
Vti1aO89116 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC13.44□□□□□ -0.26
Vti1aO89116 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC13.44□□□□□ -0.26
Vti1aO89116 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC13.44□□□□□ -0.26
Vti1aO89116 AC108416.1-202ENSMUST00000228927 1201 ntBASIC13.44□□□□□ -0.26
Vti1aO89116 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Vti1aO89116 Gm8385-201ENSMUST00000058999 643 ntBASIC13.44□□□□□ -0.26
Vti1aO89116 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vti1aO89116 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vti1aO89116 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13.44□□□□□ -0.26
Vti1aO89116 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Vti1aO89116 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vti1aO89116 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
Vti1aO89116 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC13.44□□□□□ -0.26
Vti1aO89116 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.44□□□□□ -0.26
Vti1aO89116 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.44□□□□□ -0.26
Vti1aO89116 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vti1aO89116 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vti1aO89116 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vti1aO89116 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Vti1aO89116 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vti1aO89116 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.44□□□□□ -0.26
Vti1aO89116 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vti1aO89116 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vti1aO89116 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vti1aO89116 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vti1aO89116 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vti1aO89116 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vti1aO89116 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vti1aO89116 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Vti1aO89116 AC154262.2-202ENSMUST00000225158 1331 ntBASIC13.43□□□□□ -0.26
Vti1aO89116 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vti1aO89116 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vti1aO89116 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Vti1aO89116 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vti1aO89116 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vti1aO89116 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vti1aO89116 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vti1aO89116 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vti1aO89116 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Vti1aO89116 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vti1aO89116 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC13.43□□□□□ -0.26
Vti1aO89116 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Vti1aO89116 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC13.43□□□□□ -0.26
Vti1aO89116 Gm12217-201ENSMUST00000118858 696 ntBASIC13.43□□□□□ -0.26
Vti1aO89116 Gm13813-201ENSMUST00000120998 787 ntBASIC13.43□□□□□ -0.26
Vti1aO89116 Gm12291-201ENSMUST00000121627 311 ntBASIC13.43□□□□□ -0.26
Vti1aO89116 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC13.43□□□□□ -0.26
Vti1aO89116 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC13.43□□□□□ -0.26
Vti1aO89116 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.43□□□□□ -0.26
Vti1aO89116 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vti1aO89116 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
Vti1aO89116 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vti1aO89116 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Vti1aO89116 Mir5120-201ENSMUST00000175020 78 ntBASIC13.43□□□□□ -0.26
Vti1aO89116 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC13.43□□□□□ -0.26
Vti1aO89116 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Vti1aO89116 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13.43□□□□□ -0.26
Vti1aO89116 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Vti1aO89116 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vti1aO89116 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Vti1aO89116 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vti1aO89116 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vti1aO89116 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vti1aO89116 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vti1aO89116 Gm37648-201ENSMUST00000192072 2563 ntBASIC13.43□□□□□ -0.26
Vti1aO89116 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vti1aO89116 Zkscan3-207ENSMUST00000223831 2101 ntBASIC13.43□□□□□ -0.26
Vti1aO89116 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vti1aO89116 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Vti1aO89116 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vti1aO89116 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Vti1aO89116 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.43□□□□□ -0.26
Vti1aO89116 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vti1aO89116 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC13.43□□□□□ -0.26
Vti1aO89116 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vti1aO89116 Gm4864-201ENSMUST00000219894 1461 ntBASIC13.42□□□□□ -0.26
Vti1aO89116 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vti1aO89116 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vti1aO89116 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vti1aO89116 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC13.42□□□□□ -0.26
Vti1aO89116 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vti1aO89116 Gm42840-201ENSMUST00000200303 2251 ntBASIC13.42□□□□□ -0.26
Vti1aO89116 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.42□□□□□ -0.26
Vti1aO89116 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vti1aO89116 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vti1aO89116 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vti1aO89116 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vti1aO89116 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vti1aO89116 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms