Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Syn1O88935 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Syn1O88935 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Syn1O88935 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.81□□□□□ -0.36
Syn1O88935 Gm43962-201ENSMUST00000203898 190 ntBASIC12.81□□□□□ -0.36
Syn1O88935 Gm9139-201ENSMUST00000218817 700 ntBASIC12.81□□□□□ -0.36
Syn1O88935 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Syn1O88935 Gm25201-201ENSMUST00000083093 170 ntBASIC12.81□□□□□ -0.36
Syn1O88935 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Syn1O88935 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.81□□□□□ -0.36
Syn1O88935 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.81□□□□□ -0.36
Syn1O88935 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Syn1O88935 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Syn1O88935 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Syn1O88935 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.81□□□□□ -0.36
Syn1O88935 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.81□□□□□ -0.36
Syn1O88935 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Syn1O88935 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Syn1O88935 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Syn1O88935 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Syn1O88935 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Syn1O88935 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Syn1O88935 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Syn1O88935 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Syn1O88935 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Syn1O88935 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Syn1O88935 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.81□□□□□ -0.36
Syn1O88935 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Syn1O88935 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Syn1O88935 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Syn1O88935 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Syn1O88935 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Syn1O88935 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Syn1O88935 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Syn1O88935 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Syn1O88935 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Syn1O88935 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Syn1O88935 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Syn1O88935 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Syn1O88935 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Syn1O88935 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Syn1O88935 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Syn1O88935 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Syn1O88935 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Syn1O88935 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Syn1O88935 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Syn1O88935 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Syn1O88935 Gm40377-201ENSMUST00000204604 2015 ntBASIC12.8□□□□□ -0.36
Syn1O88935 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Syn1O88935 Gm11989-201ENSMUST00000117240 672 ntBASIC12.8□□□□□ -0.36
Syn1O88935 Gm13809-201ENSMUST00000117921 597 ntBASIC12.8□□□□□ -0.36
Syn1O88935 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC12.8□□□□□ -0.36
Syn1O88935 Gm11362-201ENSMUST00000118838 850 ntBASIC12.8□□□□□ -0.36
Syn1O88935 Gm13668-201ENSMUST00000119237 1001 ntBASIC12.8□□□□□ -0.36
Syn1O88935 Gm11956-201ENSMUST00000119525 512 ntBASIC12.8□□□□□ -0.36
Syn1O88935 Gm13315-201ENSMUST00000120376 991 ntBASIC12.8□□□□□ -0.36
Syn1O88935 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Syn1O88935 Mir1956-201ENSMUST00000157748 65 ntBASIC12.8□□□□□ -0.36
Syn1O88935 Gm23085-201ENSMUST00000157849 293 ntBASIC12.8□□□□□ -0.36
Syn1O88935 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC12.8□□□□□ -0.36
Syn1O88935 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC12.8□□□□□ -0.36
Syn1O88935 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Syn1O88935 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC12.8□□□□□ -0.36
Syn1O88935 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.8□□□□□ -0.36
Syn1O88935 Gm807-202ENSMUST00000224929 408 ntBASIC12.8□□□□□ -0.36
Syn1O88935 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Syn1O88935 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Syn1O88935 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Syn1O88935 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Syn1O88935 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Syn1O88935 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Syn1O88935 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Syn1O88935 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Syn1O88935 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Syn1O88935 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Syn1O88935 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Syn1O88935 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Syn1O88935 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Syn1O88935 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Syn1O88935 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Syn1O88935 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Syn1O88935 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Syn1O88935 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Syn1O88935 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Syn1O88935 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Syn1O88935 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Syn1O88935 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Syn1O88935 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Syn1O88935 Gm11470-201ENSMUST00000118868 1475 ntBASIC12.79□□□□□ -0.36
Syn1O88935 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Syn1O88935 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Syn1O88935 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.79□□□□□ -0.36
Syn1O88935 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Syn1O88935 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Syn1O88935 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Syn1O88935 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.79□□□□□ -0.36
Syn1O88935 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.79□□□□□ -0.36
Syn1O88935 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Syn1O88935 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Syn1O88935 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms