Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ClppO88696 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
ClppO88696 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ClppO88696 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.21□□□□□ -0.45
ClppO88696 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
ClppO88696 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ClppO88696 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC12.21□□□□□ -0.45
ClppO88696 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
ClppO88696 Snord83b-201ENSMUST00000104546 94 ntBASIC12.21□□□□□ -0.45
ClppO88696 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.21□□□□□ -0.45
ClppO88696 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.21□□□□□ -0.45
ClppO88696 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
ClppO88696 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.21□□□□□ -0.45
ClppO88696 Gm14921-201ENSMUST00000118643 908 ntBASIC12.21□□□□□ -0.45
ClppO88696 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.21□□□□□ -0.45
ClppO88696 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.21□□□□□ -0.45
ClppO88696 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ClppO88696 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
ClppO88696 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
ClppO88696 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.21□□□□□ -0.45
ClppO88696 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.21□□□□□ -0.45
ClppO88696 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ClppO88696 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ClppO88696 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ClppO88696 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ClppO88696 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ClppO88696 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ClppO88696 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
ClppO88696 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
ClppO88696 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
ClppO88696 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
ClppO88696 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
ClppO88696 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.46
ClppO88696 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
ClppO88696 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
ClppO88696 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
ClppO88696 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ClppO88696 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
ClppO88696 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.2□□□□□ -0.46
ClppO88696 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
ClppO88696 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
ClppO88696 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ClppO88696 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
ClppO88696 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ClppO88696 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
ClppO88696 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
ClppO88696 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ClppO88696 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ClppO88696 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ClppO88696 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
ClppO88696 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ClppO88696 Gm12502-201ENSMUST00000120197 444 ntBASIC12.2□□□□□ -0.46
ClppO88696 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ClppO88696 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ClppO88696 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.2□□□□□ -0.46
ClppO88696 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
ClppO88696 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
ClppO88696 Gm26956-201ENSMUST00000182176 986 ntBASIC12.2□□□□□ -0.46
ClppO88696 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.2□□□□□ -0.46
ClppO88696 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.2□□□□□ -0.46
ClppO88696 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
ClppO88696 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ClppO88696 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.2□□□□□ -0.46
ClppO88696 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ClppO88696 Gm38140-201ENSMUST00000193617 2755 ntBASIC12.2□□□□□ -0.46
ClppO88696 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ClppO88696 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.2□□□□□ -0.46
ClppO88696 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
ClppO88696 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ClppO88696 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ClppO88696 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ClppO88696 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ClppO88696 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ClppO88696 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ClppO88696 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ClppO88696 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.2□□□□□ -0.46
ClppO88696 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ClppO88696 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ClppO88696 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ClppO88696 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ClppO88696 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ClppO88696 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ClppO88696 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
ClppO88696 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
ClppO88696 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ClppO88696 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC12.19□□□□□ -0.46
ClppO88696 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ClppO88696 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ClppO88696 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
ClppO88696 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.19□□□□□ -0.46
ClppO88696 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ClppO88696 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
ClppO88696 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ClppO88696 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ClppO88696 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
ClppO88696 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.19□□□□□ -0.46
ClppO88696 Gm15808-201ENSMUST00000119046 604 ntBASIC12.19□□□□□ -0.46
ClppO88696 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.19□□□□□ -0.46
ClppO88696 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ClppO88696 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms