Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Col5a1O88207 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col5a1O88207 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col5a1O88207 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col5a1O88207 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col5a1O88207 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.05□□□□□ -0.64
Col5a1O88207 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Col5a1O88207 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col5a1O88207 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col5a1O88207 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col5a1O88207 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Col5a1O88207 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col5a1O88207 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Col5a1O88207 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col5a1O88207 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Col5a1O88207 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Col5a1O88207 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col5a1O88207 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col5a1O88207 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC11.05□□□□□ -0.64
Col5a1O88207 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC11.05□□□□□ -0.64
Col5a1O88207 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Col5a1O88207 Gm9630-201ENSMUST00000178304 885 ntBASIC11.05□□□□□ -0.64
Col5a1O88207 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC11.05□□□□□ -0.64
Col5a1O88207 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Col5a1O88207 Gm8100-201ENSMUST00000182906 988 ntBASIC11.05□□□□□ -0.64
Col5a1O88207 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Col5a1O88207 Gm4034-201ENSMUST00000187674 480 ntBASIC11.05□□□□□ -0.64
Col5a1O88207 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC11.05□□□□□ -0.64
Col5a1O88207 Gm2965-201ENSMUST00000198365 343 ntBASIC11.05□□□□□ -0.64
Col5a1O88207 Gm44158-201ENSMUST00000203881 505 ntBASIC11.05□□□□□ -0.64
Col5a1O88207 Gm18204-201ENSMUST00000209835 793 ntBASIC11.05□□□□□ -0.64
Col5a1O88207 Gm7395-201ENSMUST00000216059 1045 ntBASIC11.05□□□□□ -0.64
Col5a1O88207 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC11.05□□□□□ -0.64
Col5a1O88207 AC125108.1-201ENSMUST00000218986 2330 ntBASIC11.05□□□□□ -0.64
Col5a1O88207 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col5a1O88207 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Col5a1O88207 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col5a1O88207 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Col5a1O88207 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Col5a1O88207 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Col5a1O88207 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Col5a1O88207 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col5a1O88207 Gm26616-202ENSMUST00000195676 3107 ntBASIC11.04□□□□□ -0.64
Col5a1O88207 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col5a1O88207 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.04□□□□□ -0.64
Col5a1O88207 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Col5a1O88207 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Col5a1O88207 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Col5a1O88207 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col5a1O88207 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col5a1O88207 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col5a1O88207 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col5a1O88207 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.04□□□□□ -0.64
Col5a1O88207 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col5a1O88207 Gm19680-201ENSMUST00000095050 1513 ntBASIC11.04□□□□□ -0.64
Col5a1O88207 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Col5a1O88207 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Col5a1O88207 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col5a1O88207 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Col5a1O88207 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col5a1O88207 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.04□□□□□ -0.64
Col5a1O88207 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col5a1O88207 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Col5a1O88207 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC11.04□□□□□ -0.64
Col5a1O88207 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC11.04□□□□□ -0.64
Col5a1O88207 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Col5a1O88207 Gm7722-201ENSMUST00000120646 741 ntBASIC11.04□□□□□ -0.64
Col5a1O88207 Gm14247-201ENSMUST00000120950 237 ntBASIC11.04□□□□□ -0.64
Col5a1O88207 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Col5a1O88207 Gm23045-201ENSMUST00000175041 96 ntBASIC11.04□□□□□ -0.64
Col5a1O88207 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC11.04□□□□□ -0.64
Col5a1O88207 Gm12407-201ENSMUST00000180219 324 ntBASIC11.04□□□□□ -0.64
Col5a1O88207 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC11.04□□□□□ -0.64
Col5a1O88207 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Col5a1O88207 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC11.04□□□□□ -0.64
Col5a1O88207 Gm18059-201ENSMUST00000208073 580 ntBASIC11.04□□□□□ -0.64
Col5a1O88207 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC11.04□□□□□ -0.64
Col5a1O88207 Gm19009-201ENSMUST00000223072 823 ntBASIC11.04□□□□□ -0.64
Col5a1O88207 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col5a1O88207 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col5a1O88207 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col5a1O88207 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col5a1O88207 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Col5a1O88207 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col5a1O88207 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col5a1O88207 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC11.04□□□□□ -0.64
Col5a1O88207 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
Col5a1O88207 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Col5a1O88207 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC11.04□□□□□ -0.64
Col5a1O88207 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Col5a1O88207 AC121805.2-201ENSMUST00000218808 2538 ntBASIC11.03□□□□□ -0.64
Col5a1O88207 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Col5a1O88207 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col5a1O88207 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Col5a1O88207 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Col5a1O88207 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Col5a1O88207 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col5a1O88207 Gm12579-201ENSMUST00000118040 783 ntBASIC11.03□□□□□ -0.64
Col5a1O88207 Gm12164-201ENSMUST00000121695 551 ntBASIC11.03□□□□□ -0.64
Col5a1O88207 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms