Protein–RNA interactions for Protein: O70591

Pfdn2, Prefoldin subunit 2, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn2O70591 Gm42943-201ENSMUST00000199676 3242 ntBASIC10.46□□□□□ -0.74
Pfdn2O70591 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Pfdn2O70591 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC10.46□□□□□ -0.74
Pfdn2O70591 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pfdn2O70591 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pfdn2O70591 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pfdn2O70591 Sfxn2-201ENSMUST00000026011 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pfdn2O70591 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pfdn2O70591 Cd8a-202ENSMUST00000172321 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pfdn2O70591 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pfdn2O70591 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Pfdn2O70591 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pfdn2O70591 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Pfdn2O70591 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pfdn2O70591 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pfdn2O70591 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pfdn2O70591 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Pfdn2O70591 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pfdn2O70591 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC10.45□□□□□ -0.74
Pfdn2O70591 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Pfdn2O70591 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Pfdn2O70591 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pfdn2O70591 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC10.45□□□□□ -0.74
Pfdn2O70591 Tmed9-203ENSMUST00000224741 1450 ntBASIC10.45□□□□□ -0.74
Pfdn2O70591 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pfdn2O70591 Gm23935-201ENSMUST00000102303 57 ntBASIC10.45□□□□□ -0.74
Pfdn2O70591 Gm24270-201ENSMUST00000102326 57 ntBASIC10.45□□□□□ -0.74
Pfdn2O70591 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pfdn2O70591 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC10.45□□□□□ -0.74
Pfdn2O70591 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Pfdn2O70591 Gm11893-201ENSMUST00000117829 491 ntBASIC10.45□□□□□ -0.74
Pfdn2O70591 Gm13616-201ENSMUST00000120600 222 ntBASIC10.45□□□□□ -0.74
Pfdn2O70591 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Pfdn2O70591 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Pfdn2O70591 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Pfdn2O70591 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC10.45□□□□□ -0.74
Pfdn2O70591 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Pfdn2O70591 Gm24245-201ENSMUST00000157318 57 ntBASIC10.45□□□□□ -0.74
Pfdn2O70591 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC10.45□□□□□ -0.74
Pfdn2O70591 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Pfdn2O70591 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC10.45□□□□□ -0.74
Pfdn2O70591 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pfdn2O70591 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pfdn2O70591 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pfdn2O70591 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pfdn2O70591 Olfr1212-201ENSMUST00000055895 936 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Pfdn2O70591 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pfdn2O70591 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Pfdn2O70591 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Pfdn2O70591 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC10.45□□□□□ -0.74
Pfdn2O70591 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pfdn2O70591 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Pfdn2O70591 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pfdn2O70591 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Pfdn2O70591 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pfdn2O70591 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pfdn2O70591 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pfdn2O70591 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Pfdn2O70591 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pfdn2O70591 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC10.45□□□□□ -0.74
Pfdn2O70591 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pfdn2O70591 Pld5-203ENSMUST00000111167 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pfdn2O70591 Gm40655-201ENSMUST00000220802 1880 ntTSL 5 BASIC10.44□□□□□ -0.74
Pfdn2O70591 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Pfdn2O70591 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pfdn2O70591 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pfdn2O70591 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Pfdn2O70591 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pfdn2O70591 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Pfdn2O70591 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC10.44□□□□□ -0.74
Pfdn2O70591 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Pfdn2O70591 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Pfdn2O70591 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pfdn2O70591 Gm44401-201ENSMUST00000204462 2375 ntBASIC10.44□□□□□ -0.74
Pfdn2O70591 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Pfdn2O70591 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pfdn2O70591 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pfdn2O70591 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Pfdn2O70591 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC10.44□□□□□ -0.74
Pfdn2O70591 Gm4875-201ENSMUST00000118257 786 ntBASIC10.44□□□□□ -0.74
Pfdn2O70591 Gm12485-201ENSMUST00000119641 291 ntBASIC10.44□□□□□ -0.74
Pfdn2O70591 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Pfdn2O70591 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC10.44□□□□□ -0.74
Pfdn2O70591 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Pfdn2O70591 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC10.44□□□□□ -0.74
Pfdn2O70591 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC10.44□□□□□ -0.74
Pfdn2O70591 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC10.44□□□□□ -0.74
Pfdn2O70591 Gm45841-201ENSMUST00000207700 164 ntBASIC10.44□□□□□ -0.74
Pfdn2O70591 AC155266.1-201ENSMUST00000220762 904 ntBASIC10.44□□□□□ -0.74
Pfdn2O70591 AC093022.5-201ENSMUST00000226841 1079 ntBASIC10.44□□□□□ -0.74
Pfdn2O70591 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Pfdn2O70591 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pfdn2O70591 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pfdn2O70591 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pfdn2O70591 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC10.44□□□□□ -0.74
Pfdn2O70591 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Pfdn2O70591 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC10.44□□□□□ -0.74
Pfdn2O70591 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC10.44□□□□□ -0.74
Pfdn2O70591 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC10.44□□□□□ -0.74
Pfdn2O70591 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms