Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
Pdlim1O70400 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pdlim1O70400 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pdlim1O70400 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Pdlim1O70400 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.31□□□□□ -0.44
Pdlim1O70400 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pdlim1O70400 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pdlim1O70400 Cts7-204ENSMUST00000225321 1257 ntBASIC12.31□□□□□ -0.44
Pdlim1O70400 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pdlim1O70400 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Pdlim1O70400 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pdlim1O70400 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pdlim1O70400 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pdlim1O70400 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pdlim1O70400 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pdlim1O70400 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC12.31□□□□□ -0.44
Pdlim1O70400 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pdlim1O70400 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pdlim1O70400 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Pdlim1O70400 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pdlim1O70400 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Pdlim1O70400 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pdlim1O70400 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pdlim1O70400 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pdlim1O70400 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pdlim1O70400 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pdlim1O70400 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Pdlim1O70400 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Pdlim1O70400 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pdlim1O70400 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Pdlim1O70400 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pdlim1O70400 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pdlim1O70400 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pdlim1O70400 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pdlim1O70400 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pdlim1O70400 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pdlim1O70400 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pdlim1O70400 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pdlim1O70400 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Pdlim1O70400 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pdlim1O70400 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.3□□□□□ -0.44
Pdlim1O70400 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pdlim1O70400 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pdlim1O70400 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pdlim1O70400 Gm6334-201ENSMUST00000207083 228 ntBASIC12.3□□□□□ -0.44
Pdlim1O70400 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.3□□□□□ -0.44
Pdlim1O70400 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pdlim1O70400 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pdlim1O70400 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pdlim1O70400 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pdlim1O70400 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Pdlim1O70400 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.3□□□□□ -0.44
Pdlim1O70400 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pdlim1O70400 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Pdlim1O70400 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pdlim1O70400 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pdlim1O70400 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pdlim1O70400 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.3□□□□□ -0.44
Pdlim1O70400 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.3□□□□□ -0.44
Pdlim1O70400 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Pdlim1O70400 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pdlim1O70400 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pdlim1O70400 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pdlim1O70400 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pdlim1O70400 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pdlim1O70400 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.29□□□□□ -0.44
Pdlim1O70400 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pdlim1O70400 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pdlim1O70400 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pdlim1O70400 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pdlim1O70400 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pdlim1O70400 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pdlim1O70400 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Pdlim1O70400 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pdlim1O70400 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Pdlim1O70400 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pdlim1O70400 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pdlim1O70400 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Pdlim1O70400 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pdlim1O70400 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Pdlim1O70400 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pdlim1O70400 Gm14723-201ENSMUST00000118686 215 ntBASIC12.29□□□□□ -0.44
Pdlim1O70400 Gm14832-201ENSMUST00000121289 322 ntBASIC12.29□□□□□ -0.44
Pdlim1O70400 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pdlim1O70400 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.29□□□□□ -0.44
Pdlim1O70400 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.29□□□□□ -0.44
Pdlim1O70400 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Pdlim1O70400 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pdlim1O70400 Gm31256-201ENSMUST00000194705 506 ntBASIC12.29□□□□□ -0.44
Pdlim1O70400 Gm38341-201ENSMUST00000195357 515 ntBASIC12.29□□□□□ -0.44
Pdlim1O70400 Gm42937-201ENSMUST00000197360 752 ntBASIC12.29□□□□□ -0.44
Pdlim1O70400 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pdlim1O70400 Gm43822-201ENSMUST00000200285 476 ntBASIC12.29□□□□□ -0.44
Pdlim1O70400 Gm44882-201ENSMUST00000205702 802 ntBASIC12.29□□□□□ -0.44
Pdlim1O70400 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Pdlim1O70400 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pdlim1O70400 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pdlim1O70400 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pdlim1O70400 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pdlim1O70400 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms