Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trdmt1O55055 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Trdmt1O55055 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.65□□□□□ -0.22
Trdmt1O55055 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trdmt1O55055 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Trdmt1O55055 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trdmt1O55055 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trdmt1O55055 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trdmt1O55055 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trdmt1O55055 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Trdmt1O55055 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
Trdmt1O55055 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trdmt1O55055 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trdmt1O55055 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trdmt1O55055 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trdmt1O55055 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trdmt1O55055 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trdmt1O55055 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trdmt1O55055 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trdmt1O55055 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trdmt1O55055 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trdmt1O55055 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC13.64□□□□□ -0.23
Trdmt1O55055 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC13.64□□□□□ -0.23
Trdmt1O55055 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trdmt1O55055 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Trdmt1O55055 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trdmt1O55055 Gm12029-201ENSMUST00000120073 832 ntBASIC13.64□□□□□ -0.23
Trdmt1O55055 Gm8566-201ENSMUST00000120174 465 ntBASIC13.64□□□□□ -0.23
Trdmt1O55055 Gm8199-201ENSMUST00000121323 823 ntBASIC13.64□□□□□ -0.23
Trdmt1O55055 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trdmt1O55055 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC13.64□□□□□ -0.23
Trdmt1O55055 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC13.64□□□□□ -0.23
Trdmt1O55055 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trdmt1O55055 Gm42629-201ENSMUST00000199063 1102 ntBASIC13.64□□□□□ -0.23
Trdmt1O55055 Gm18711-201ENSMUST00000199341 750 ntBASIC13.64□□□□□ -0.23
Trdmt1O55055 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trdmt1O55055 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC13.64□□□□□ -0.23
Trdmt1O55055 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trdmt1O55055 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trdmt1O55055 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Trdmt1O55055 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Trdmt1O55055 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trdmt1O55055 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trdmt1O55055 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trdmt1O55055 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC13.64□□□□□ -0.23
Trdmt1O55055 Zkscan3-207ENSMUST00000223831 2101 ntBASIC13.64□□□□□ -0.23
Trdmt1O55055 Gm37324-201ENSMUST00000194500 4504 ntBASIC13.64□□□□□ -0.23
Trdmt1O55055 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trdmt1O55055 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trdmt1O55055 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trdmt1O55055 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trdmt1O55055 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trdmt1O55055 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trdmt1O55055 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trdmt1O55055 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.63□□□□□ -0.23
Trdmt1O55055 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trdmt1O55055 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trdmt1O55055 Gm9129-201ENSMUST00000218173 1689 ntBASIC13.63□□□□□ -0.23
Trdmt1O55055 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trdmt1O55055 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trdmt1O55055 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trdmt1O55055 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trdmt1O55055 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trdmt1O55055 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trdmt1O55055 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trdmt1O55055 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trdmt1O55055 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC13.63□□□□□ -0.23
Trdmt1O55055 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC13.63□□□□□ -0.23
Trdmt1O55055 Gm6397-201ENSMUST00000161973 1069 ntBASIC13.63□□□□□ -0.23
Trdmt1O55055 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trdmt1O55055 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
Trdmt1O55055 Gm10774-201ENSMUST00000188689 204 ntBASIC13.63□□□□□ -0.23
Trdmt1O55055 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC13.63□□□□□ -0.23
Trdmt1O55055 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC13.63□□□□□ -0.23
Trdmt1O55055 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC13.63□□□□□ -0.23
Trdmt1O55055 Gm43830-201ENSMUST00000198760 1067 ntBASIC13.63□□□□□ -0.23
Trdmt1O55055 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC13.63□□□□□ -0.23
Trdmt1O55055 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC13.63□□□□□ -0.23
Trdmt1O55055 AC159103.1-201ENSMUST00000228325 429 ntBASIC13.63□□□□□ -0.23
Trdmt1O55055 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trdmt1O55055 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trdmt1O55055 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trdmt1O55055 Gm10288-201ENSMUST00000084614 537 ntBASIC13.63□□□□□ -0.23
Trdmt1O55055 Gm7551-201ENSMUST00000089593 1074 ntBASIC13.63□□□□□ -0.23
Trdmt1O55055 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trdmt1O55055 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.63□□□□□ -0.23
Trdmt1O55055 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trdmt1O55055 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trdmt1O55055 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trdmt1O55055 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trdmt1O55055 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trdmt1O55055 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trdmt1O55055 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trdmt1O55055 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trdmt1O55055 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trdmt1O55055 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trdmt1O55055 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.63□□□□□ -0.23
Trdmt1O55055 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trdmt1O55055 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trdmt1O55055 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms