Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Npc1O35604 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
Npc1O35604 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.15□□□□□ -0.47
Npc1O35604 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Npc1O35604 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Npc1O35604 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Npc1O35604 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.14□□□□□ -0.47
Npc1O35604 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Npc1O35604 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Npc1O35604 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Npc1O35604 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Npc1O35604 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Npc1O35604 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Npc1O35604 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Npc1O35604 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Npc1O35604 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Npc1O35604 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Npc1O35604 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Npc1O35604 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.14□□□□□ -0.47
Npc1O35604 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Npc1O35604 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Npc1O35604 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Npc1O35604 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Npc1O35604 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Npc1O35604 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.14□□□□□ -0.47
Npc1O35604 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Npc1O35604 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Npc1O35604 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Npc1O35604 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Npc1O35604 Gm22323-201ENSMUST00000103832 109 ntBASIC12.14□□□□□ -0.47
Npc1O35604 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Npc1O35604 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC12.14□□□□□ -0.47
Npc1O35604 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Npc1O35604 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Npc1O35604 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Npc1O35604 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.14□□□□□ -0.47
Npc1O35604 Gm37259-201ENSMUST00000193903 849 ntBASIC12.14□□□□□ -0.47
Npc1O35604 Gm31256-201ENSMUST00000194705 506 ntBASIC12.14□□□□□ -0.47
Npc1O35604 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Npc1O35604 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.14□□□□□ -0.47
Npc1O35604 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Npc1O35604 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Npc1O35604 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Npc1O35604 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Npc1O35604 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Npc1O35604 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Npc1O35604 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Npc1O35604 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Npc1O35604 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Npc1O35604 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.14□□□□□ -0.47
Npc1O35604 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.14□□□□□ -0.47
Npc1O35604 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Npc1O35604 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Npc1O35604 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Npc1O35604 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.14□□□□□ -0.47
Npc1O35604 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Npc1O35604 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Npc1O35604 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Npc1O35604 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Npc1O35604 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Npc1O35604 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Npc1O35604 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.13□□□□□ -0.47
Npc1O35604 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Npc1O35604 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Npc1O35604 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.13□□□□□ -0.47
Npc1O35604 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.13□□□□□ -0.47
Npc1O35604 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.13□□□□□ -0.47
Npc1O35604 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Npc1O35604 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.13□□□□□ -0.47
Npc1O35604 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.13□□□□□ -0.47
Npc1O35604 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Npc1O35604 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Npc1O35604 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Npc1O35604 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Npc1O35604 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Npc1O35604 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Npc1O35604 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Npc1O35604 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Npc1O35604 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Npc1O35604 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Npc1O35604 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Npc1O35604 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
Npc1O35604 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Npc1O35604 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Npc1O35604 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Npc1O35604 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Npc1O35604 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.12□□□□□ -0.47
Npc1O35604 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Npc1O35604 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Npc1O35604 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Npc1O35604 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Npc1O35604 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Npc1O35604 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Npc1O35604 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Npc1O35604 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Npc1O35604 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Npc1O35604 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Npc1O35604 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Npc1O35604 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Npc1O35604 Gm26083-201ENSMUST00000157904 193 ntBASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms