Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Slc1a6O35544 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.22□□□□□ -0.45
Slc1a6O35544 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.22□□□□□ -0.45
Slc1a6O35544 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Slc1a6O35544 Gm14057-201ENSMUST00000120631 482 ntBASIC12.22□□□□□ -0.45
Slc1a6O35544 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.22□□□□□ -0.45
Slc1a6O35544 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Slc1a6O35544 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.22□□□□□ -0.45
Slc1a6O35544 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.22□□□□□ -0.45
Slc1a6O35544 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.22□□□□□ -0.45
Slc1a6O35544 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.22□□□□□ -0.45
Slc1a6O35544 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.22□□□□□ -0.45
Slc1a6O35544 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.22□□□□□ -0.45
Slc1a6O35544 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Slc1a6O35544 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Slc1a6O35544 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.22□□□□□ -0.45
Slc1a6O35544 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Slc1a6O35544 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Slc1a6O35544 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Slc1a6O35544 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Slc1a6O35544 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC12.22□□□□□ -0.45
Slc1a6O35544 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Slc1a6O35544 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Slc1a6O35544 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Slc1a6O35544 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Slc1a6O35544 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.22□□□□□ -0.45
Slc1a6O35544 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Slc1a6O35544 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.22□□□□□ -0.45
Slc1a6O35544 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Slc1a6O35544 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.22□□□□□ -0.45
Slc1a6O35544 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Slc1a6O35544 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Slc1a6O35544 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Slc1a6O35544 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Slc1a6O35544 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Slc1a6O35544 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Slc1a6O35544 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC12.21□□□□□ -0.45
Slc1a6O35544 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Slc1a6O35544 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Slc1a6O35544 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Slc1a6O35544 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Slc1a6O35544 Gm38273-201ENSMUST00000194987 2382 ntBASIC12.21□□□□□ -0.45
Slc1a6O35544 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Slc1a6O35544 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Slc1a6O35544 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Slc1a6O35544 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.21□□□□□ -0.45
Slc1a6O35544 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Slc1a6O35544 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Slc1a6O35544 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Slc1a6O35544 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Slc1a6O35544 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.21□□□□□ -0.45
Slc1a6O35544 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Slc1a6O35544 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Slc1a6O35544 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Slc1a6O35544 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Slc1a6O35544 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Slc1a6O35544 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.21□□□□□ -0.45
Slc1a6O35544 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Slc1a6O35544 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Slc1a6O35544 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.21□□□□□ -0.45
Slc1a6O35544 Gm38092-201ENSMUST00000195600 653 ntBASIC12.21□□□□□ -0.45
Slc1a6O35544 Gm43172-201ENSMUST00000202139 2137 ntBASIC12.21□□□□□ -0.45
Slc1a6O35544 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Slc1a6O35544 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Slc1a6O35544 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Slc1a6O35544 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC12.21□□□□□ -0.45
Slc1a6O35544 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Slc1a6O35544 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Slc1a6O35544 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Slc1a6O35544 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Slc1a6O35544 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Slc1a6O35544 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Slc1a6O35544 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Slc1a6O35544 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Slc1a6O35544 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.21□□□□□ -0.46
Slc1a6O35544 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.21□□□□□ -0.46
Slc1a6O35544 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Slc1a6O35544 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Slc1a6O35544 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Slc1a6O35544 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Slc1a6O35544 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Slc1a6O35544 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slc1a6O35544 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slc1a6O35544 Cog3-203ENSMUST00000227473 4197 ntBASIC12.2□□□□□ -0.46
Slc1a6O35544 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Slc1a6O35544 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slc1a6O35544 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Slc1a6O35544 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slc1a6O35544 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slc1a6O35544 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slc1a6O35544 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slc1a6O35544 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Slc1a6O35544 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Slc1a6O35544 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slc1a6O35544 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slc1a6O35544 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.2□□□□□ -0.46
Slc1a6O35544 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Slc1a6O35544 Gm12859-201ENSMUST00000117834 427 ntBASIC12.2□□□□□ -0.46
Slc1a6O35544 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.2□□□□□ -0.46
Slc1a6O35544 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms