Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.08□□□□□ -0.64
Alx4O35137 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Alx4O35137 Gm45532-201ENSMUST00000210342 3620 ntBASIC11.08□□□□□ -0.64
Alx4O35137 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Alx4O35137 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Alx4O35137 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Alx4O35137 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Alx4O35137 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.08□□□□□ -0.64
Alx4O35137 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Alx4O35137 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Alx4O35137 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Alx4O35137 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Alx4O35137 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Alx4O35137 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Alx4O35137 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Alx4O35137 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Alx4O35137 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.08□□□□□ -0.64
Alx4O35137 Gm4034-201ENSMUST00000187674 480 ntBASIC11.08□□□□□ -0.64
Alx4O35137 Gm28911-201ENSMUST00000188837 117 ntBASIC11.08□□□□□ -0.64
Alx4O35137 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC11.08□□□□□ -0.64
Alx4O35137 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC11.08□□□□□ -0.64
Alx4O35137 Gm32025-201ENSMUST00000217960 307 ntBASIC11.08□□□□□ -0.64
Alx4O35137 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC11.08□□□□□ -0.64
Alx4O35137 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Alx4O35137 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Alx4O35137 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Alx4O35137 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Alx4O35137 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Alx4O35137 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Alx4O35137 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Alx4O35137 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Alx4O35137 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Alx4O35137 AC124577.2-201ENSMUST00000217413 2420 ntBASIC11.08□□□□□ -0.64
Alx4O35137 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Alx4O35137 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.08□□□□□ -0.64
Alx4O35137 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Alx4O35137 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Alx4O35137 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.08□□□□□ -0.64
Alx4O35137 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Alx4O35137 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Alx4O35137 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Alx4O35137 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Alx4O35137 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
Alx4O35137 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Alx4O35137 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Alx4O35137 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.08□□□□□ -0.64
Alx4O35137 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Alx4O35137 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Alx4O35137 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.08□□□□□ -0.64
Alx4O35137 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Alx4O35137 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Alx4O35137 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Alx4O35137 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Alx4O35137 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Alx4O35137 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Alx4O35137 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.07□□□□□ -0.64
Alx4O35137 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Alx4O35137 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Alx4O35137 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Alx4O35137 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Alx4O35137 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Alx4O35137 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Alx4O35137 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Alx4O35137 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Alx4O35137 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Alx4O35137 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Alx4O35137 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Alx4O35137 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC11.07□□□□□ -0.64
Alx4O35137 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC11.07□□□□□ -0.64
Alx4O35137 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Alx4O35137 Gm11964-201ENSMUST00000120982 444 ntBASIC11.07□□□□□ -0.64
Alx4O35137 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Alx4O35137 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC11.07□□□□□ -0.64
Alx4O35137 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC11.07□□□□□ -0.64
Alx4O35137 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.07□□□□□ -0.64
Alx4O35137 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC11.07□□□□□ -0.64
Alx4O35137 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Alx4O35137 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC11.07□□□□□ -0.64
Alx4O35137 Gm43172-201ENSMUST00000202139 2137 ntBASIC11.07□□□□□ -0.64
Alx4O35137 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Alx4O35137 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Alx4O35137 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Alx4O35137 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Alx4O35137 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Alx4O35137 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Alx4O35137 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Alx4O35137 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC11.07□□□□□ -0.64
Alx4O35137 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Alx4O35137 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Alx4O35137 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Alx4O35137 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Alx4O35137 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.07□□□□□ -0.64
Alx4O35137 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Alx4O35137 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.07□□□□□ -0.64
Alx4O35137 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Alx4O35137 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Alx4O35137 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Alx4O35137 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Alx4O35137 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
Alx4O35137 Gm15991-202ENSMUST00000212123 3565 ntBASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms