Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tcof1O08784 Gm10782-202ENSMUST00000223775 1480 ntBASIC14.53□□□□□ -0.08
Tcof1O08784 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tcof1O08784 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tcof1O08784 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC14.53□□□□□ -0.08
Tcof1O08784 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC14.53□□□□□ -0.08
Tcof1O08784 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC14.53□□□□□ -0.08
Tcof1O08784 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tcof1O08784 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tcof1O08784 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Tcof1O08784 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC14.53□□□□□ -0.08
Tcof1O08784 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Tcof1O08784 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tcof1O08784 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC14.53□□□□□ -0.08
Tcof1O08784 Gm45186-201ENSMUST00000206874 478 ntBASIC14.53□□□□□ -0.08
Tcof1O08784 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC14.53□□□□□ -0.08
Tcof1O08784 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tcof1O08784 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tcof1O08784 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tcof1O08784 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tcof1O08784 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
Tcof1O08784 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Tcof1O08784 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tcof1O08784 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tcof1O08784 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tcof1O08784 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tcof1O08784 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tcof1O08784 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Tcof1O08784 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.53□□□□□ -0.08
Tcof1O08784 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tcof1O08784 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tcof1O08784 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tcof1O08784 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tcof1O08784 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Tcof1O08784 Zfp125-201ENSMUST00000079237 2488 ntBASIC14.52□□□□□ -0.08
Tcof1O08784 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tcof1O08784 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Tcof1O08784 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Tcof1O08784 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Tcof1O08784 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tcof1O08784 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tcof1O08784 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tcof1O08784 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Tcof1O08784 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Tcof1O08784 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tcof1O08784 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tcof1O08784 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tcof1O08784 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tcof1O08784 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tcof1O08784 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Tcof1O08784 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tcof1O08784 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Tcof1O08784 Gm15276-201ENSMUST00000145953 498 ntBASIC14.52□□□□□ -0.08
Tcof1O08784 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Tcof1O08784 Gm5869-201ENSMUST00000200248 1257 ntBASIC14.52□□□□□ -0.08
Tcof1O08784 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC14.52□□□□□ -0.08
Tcof1O08784 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC14.52□□□□□ -0.08
Tcof1O08784 Gm45224-201ENSMUST00000208203 414 ntBASIC14.52□□□□□ -0.08
Tcof1O08784 AC166344.1-202ENSMUST00000224139 234 ntBASIC14.52□□□□□ -0.08
Tcof1O08784 AC161537.1-201ENSMUST00000226199 1015 ntBASIC14.52□□□□□ -0.08
Tcof1O08784 AC126253.1-202ENSMUST00000226732 835 ntBASIC14.52□□□□□ -0.08
Tcof1O08784 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tcof1O08784 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC14.52□□□□□ -0.09
Tcof1O08784 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tcof1O08784 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tcof1O08784 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tcof1O08784 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tcof1O08784 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tcof1O08784 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tcof1O08784 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Tcof1O08784 AC126262.1-201ENSMUST00000221802 1904 ntBASIC14.52□□□□□ -0.09
Tcof1O08784 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tcof1O08784 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Tcof1O08784 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Tcof1O08784 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tcof1O08784 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tcof1O08784 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tcof1O08784 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Tcof1O08784 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tcof1O08784 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tcof1O08784 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tcof1O08784 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tcof1O08784 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tcof1O08784 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tcof1O08784 AC126444.1-201ENSMUST00000225938 1768 ntBASIC14.52□□□□□ -0.09
Tcof1O08784 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tcof1O08784 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Tcof1O08784 Gm5780-201ENSMUST00000217774 1834 ntBASIC14.51□□□□□ -0.09
Tcof1O08784 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tcof1O08784 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Tcof1O08784 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tcof1O08784 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Tcof1O08784 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tcof1O08784 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Tcof1O08784 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Tcof1O08784 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Tcof1O08784 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC14.51□□□□□ -0.09
Tcof1O08784 AC122197.2-201ENSMUST00000219196 1635 ntBASIC14.51□□□□□ -0.09
Tcof1O08784 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Tcof1O08784 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 122 ms