Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm27701-201ENSMUST00000184498 110 ntBASIC11.19□□□□□ -0.62
Pcdh1F7BJK1 Gm37922-201ENSMUST00000195596 455 ntBASIC11.19□□□□□ -0.62
Pcdh1F7BJK1 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh1F7BJK1 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh1F7BJK1 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh1F7BJK1 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC11.19□□□□□ -0.62
Pcdh1F7BJK1 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC11.19□□□□□ -0.62
Pcdh1F7BJK1 AC134254.1-201ENSMUST00000221362 167 ntBASIC11.19□□□□□ -0.62
Pcdh1F7BJK1 AC154239.3-201ENSMUST00000226933 674 ntBASIC11.19□□□□□ -0.62
Pcdh1F7BJK1 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh1F7BJK1 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh1F7BJK1 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh1F7BJK1 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh1F7BJK1 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh1F7BJK1 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.19□□□□□ -0.62
Pcdh1F7BJK1 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC11.19□□□□□ -0.62
Pcdh1F7BJK1 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh1F7BJK1 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh1F7BJK1 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh1F7BJK1 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh1F7BJK1 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh1F7BJK1 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh1F7BJK1 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.19□□□□□ -0.62
Pcdh1F7BJK1 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh1F7BJK1 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh1F7BJK1 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh1F7BJK1 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh1F7BJK1 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.18□□□□□ -0.62
Pcdh1F7BJK1 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh1F7BJK1 Gm5912-201ENSMUST00000122282 1438 ntBASIC11.18□□□□□ -0.62
Pcdh1F7BJK1 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh1F7BJK1 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh1F7BJK1 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh1F7BJK1 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Pcdh1F7BJK1 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.18□□□□□ -0.62
Pcdh1F7BJK1 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh1F7BJK1 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh1F7BJK1 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh1F7BJK1 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh1F7BJK1 Gm9115-201ENSMUST00000120192 1348 ntBASIC11.18□□□□□ -0.62
Pcdh1F7BJK1 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh1F7BJK1 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh1F7BJK1 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Pcdh1F7BJK1 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Pcdh1F7BJK1 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh1F7BJK1 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh1F7BJK1 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh1F7BJK1 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh1F7BJK1 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh1F7BJK1 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC11.18□□□□□ -0.62
Pcdh1F7BJK1 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC11.18□□□□□ -0.62
Pcdh1F7BJK1 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Pcdh1F7BJK1 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh1F7BJK1 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.18□□□□□ -0.62
Pcdh1F7BJK1 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC11.18□□□□□ -0.62
Pcdh1F7BJK1 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC11.18□□□□□ -0.62
Pcdh1F7BJK1 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh1F7BJK1 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh1F7BJK1 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC11.18□□□□□ -0.62
Pcdh1F7BJK1 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Pcdh1F7BJK1 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh1F7BJK1 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC11.18□□□□□ -0.62
Pcdh1F7BJK1 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh1F7BJK1 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh1F7BJK1 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh1F7BJK1 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh1F7BJK1 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Pcdh1F7BJK1 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.18□□□□□ -0.62
Pcdh1F7BJK1 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh1F7BJK1 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh1F7BJK1 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh1F7BJK1 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh1F7BJK1 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh1F7BJK1 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh1F7BJK1 Gm44775-201ENSMUST00000207266 1456 ntBASIC11.18□□□□□ -0.62
Pcdh1F7BJK1 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Pcdh1F7BJK1 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh1F7BJK1 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh1F7BJK1 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Pcdh1F7BJK1 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh1F7BJK1 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Pcdh1F7BJK1 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Pcdh1F7BJK1 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh1F7BJK1 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh1F7BJK1 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh1F7BJK1 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh1F7BJK1 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh1F7BJK1 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.17□□□□□ -0.62
Pcdh1F7BJK1 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Pcdh1F7BJK1 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC11.17□□□□□ -0.62
Pcdh1F7BJK1 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh1F7BJK1 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh1F7BJK1 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh1F7BJK1 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh1F7BJK1 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh1F7BJK1 Mir692-1-201ENSMUST00000102263 109 ntBASIC11.17□□□□□ -0.62
Pcdh1F7BJK1 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Pcdh1F7BJK1 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC11.17□□□□□ -0.62
Pcdh1F7BJK1 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh1F7BJK1 Gm2231-201ENSMUST00000125661 612 ntBASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms