Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Gm12164-201ENSMUST00000121695 551 ntBASIC14.87□□□□□ -0.03
Ube4aE9Q735 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC14.87□□□□□ -0.03
Ube4aE9Q735 Cd63-ps-202ENSMUST00000154992 717 ntBASIC14.87□□□□□ -0.03
Ube4aE9Q735 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Ube4aE9Q735 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC14.87□□□□□ -0.03
Ube4aE9Q735 Gm42629-201ENSMUST00000199063 1102 ntBASIC14.87□□□□□ -0.03
Ube4aE9Q735 Gm10109-202ENSMUST00000206890 1211 ntBASIC14.87□□□□□ -0.03
Ube4aE9Q735 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC14.87□□□□□ -0.03
Ube4aE9Q735 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC14.87□□□□□ -0.03
Ube4aE9Q735 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC14.87□□□□□ -0.03
Ube4aE9Q735 CT009713.8-201ENSMUST00000225448 560 ntBASIC14.87□□□□□ -0.03
Ube4aE9Q735 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ube4aE9Q735 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC14.87□□□□□ -0.03
Ube4aE9Q735 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ube4aE9Q735 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ube4aE9Q735 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ube4aE9Q735 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ube4aE9Q735 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Ube4aE9Q735 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC14.87□□□□□ -0.03
Ube4aE9Q735 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ube4aE9Q735 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ube4aE9Q735 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ube4aE9Q735 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ube4aE9Q735 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ube4aE9Q735 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ube4aE9Q735 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ube4aE9Q735 Gm9361-201ENSMUST00000198695 1507 ntBASIC14.87□□□□□ -0.03
Ube4aE9Q735 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ube4aE9Q735 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ube4aE9Q735 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ube4aE9Q735 Gm43081-201ENSMUST00000199082 1380 ntBASIC14.86□□□□□ -0.03
Ube4aE9Q735 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ube4aE9Q735 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ube4aE9Q735 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ube4aE9Q735 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ube4aE9Q735 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC14.86□□□□□ -0.03
Ube4aE9Q735 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ube4aE9Q735 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ube4aE9Q735 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC14.86□□□□□ -0.03
Ube4aE9Q735 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ube4aE9Q735 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ube4aE9Q735 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ube4aE9Q735 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ube4aE9Q735 Gm11509-201ENSMUST00000117358 325 ntBASIC14.86□□□□□ -0.03
Ube4aE9Q735 Gm14247-201ENSMUST00000120950 237 ntBASIC14.86□□□□□ -0.03
Ube4aE9Q735 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ube4aE9Q735 Gm23085-201ENSMUST00000157849 293 ntBASIC14.86□□□□□ -0.03
Ube4aE9Q735 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ube4aE9Q735 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ube4aE9Q735 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ube4aE9Q735 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ube4aE9Q735 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Ube4aE9Q735 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ube4aE9Q735 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Ube4aE9Q735 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ube4aE9Q735 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Ube4aE9Q735 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ube4aE9Q735 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Ube4aE9Q735 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ube4aE9Q735 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.86□□□□□ -0.03
Ube4aE9Q735 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ube4aE9Q735 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ube4aE9Q735 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ube4aE9Q735 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ube4aE9Q735 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ube4aE9Q735 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ube4aE9Q735 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ube4aE9Q735 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ube4aE9Q735 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC14.85□□□□□ -0.03
Ube4aE9Q735 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ube4aE9Q735 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ube4aE9Q735 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Ube4aE9Q735 Gm15432-201ENSMUST00000121106 195 ntBASIC14.85□□□□□ -0.03
Ube4aE9Q735 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Ube4aE9Q735 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ube4aE9Q735 Gm9630-201ENSMUST00000178304 885 ntBASIC14.85□□□□□ -0.03
Ube4aE9Q735 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Ube4aE9Q735 Gm8100-201ENSMUST00000182906 988 ntBASIC14.85□□□□□ -0.03
Ube4aE9Q735 Gm37835-201ENSMUST00000193305 361 ntBASIC14.85□□□□□ -0.03
Ube4aE9Q735 Gm42682-201ENSMUST00000198349 1265 ntBASIC14.85□□□□□ -0.03
Ube4aE9Q735 Gm1821-202ENSMUST00000227415 750 ntBASIC14.85□□□□□ -0.03
Ube4aE9Q735 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ube4aE9Q735 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Ube4aE9Q735 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ube4aE9Q735 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ube4aE9Q735 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ube4aE9Q735 Gm9072-201ENSMUST00000218390 1514 ntBASIC14.85□□□□□ -0.03
Ube4aE9Q735 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ube4aE9Q735 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ube4aE9Q735 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC14.85□□□□□ -0.03
Ube4aE9Q735 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ube4aE9Q735 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ube4aE9Q735 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ube4aE9Q735 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Ube4aE9Q735 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ube4aE9Q735 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.84□□□□□ -0.03
Ube4aE9Q735 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ube4aE9Q735 Gm43677-201ENSMUST00000198098 2378 ntBASIC14.84□□□□□ -0.03
Ube4aE9Q735 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Ube4aE9Q735 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms