Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC12.04□□□□□ -0.48
Col6a3E9PWQ3 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a3E9PWQ3 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a3E9PWQ3 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a3E9PWQ3 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Col6a3E9PWQ3 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a3E9PWQ3 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.03□□□□□ -0.48
Col6a3E9PWQ3 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a3E9PWQ3 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a3E9PWQ3 Hsf2-204ENSMUST00000220042 2430 ntTSL 5 BASIC12.03□□□□□ -0.48
Col6a3E9PWQ3 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Col6a3E9PWQ3 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a3E9PWQ3 Gm16552-201ENSMUST00000162348 685 ntTSL 3 BASIC12.03□□□□□ -0.48
Col6a3E9PWQ3 Gm45113-201ENSMUST00000207518 165 ntBASIC12.03□□□□□ -0.48
Col6a3E9PWQ3 AC124356.1-201ENSMUST00000221469 698 ntBASIC12.03□□□□□ -0.48
Col6a3E9PWQ3 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a3E9PWQ3 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a3E9PWQ3 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Col6a3E9PWQ3 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Col6a3E9PWQ3 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a3E9PWQ3 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a3E9PWQ3 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Col6a3E9PWQ3 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a3E9PWQ3 Gm16280-201ENSMUST00000162458 623 ntTSL 3 BASIC12.03□□□□□ -0.48
Col6a3E9PWQ3 Tex33-202ENSMUST00000165170 1072 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a3E9PWQ3 6530411M01Rik-201ENSMUST00000181618 1033 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a3E9PWQ3 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a3E9PWQ3 Gm18035-201ENSMUST00000211962 589 ntBASIC12.03□□□□□ -0.48
Col6a3E9PWQ3 AC154461.1-201ENSMUST00000224207 1005 ntBASIC12.03□□□□□ -0.48
Col6a3E9PWQ3 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC12.03□□□□□ -0.48
Col6a3E9PWQ3 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a3E9PWQ3 Olfr1015-201ENSMUST00000047870 1016 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Col6a3E9PWQ3 Tex33-201ENSMUST00000074380 1147 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a3E9PWQ3 Gm43167-201ENSMUST00000202001 1606 ntBASIC12.03□□□□□ -0.48
Col6a3E9PWQ3 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a3E9PWQ3 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a3E9PWQ3 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a3E9PWQ3 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a3E9PWQ3 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a3E9PWQ3 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a3E9PWQ3 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Col6a3E9PWQ3 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a3E9PWQ3 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a3E9PWQ3 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a3E9PWQ3 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Col6a3E9PWQ3 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a3E9PWQ3 Mir704-201ENSMUST00000102106 77 ntBASIC12.03□□□□□ -0.48
Col6a3E9PWQ3 Fthl17b-201ENSMUST00000105006 842 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Col6a3E9PWQ3 Gm38151-201ENSMUST00000195085 289 ntBASIC12.03□□□□□ -0.48
Col6a3E9PWQ3 BB187690-201ENSMUST00000198619 1176 ntBASIC12.03□□□□□ -0.48
Col6a3E9PWQ3 Gm6518-201ENSMUST00000208450 342 ntBASIC12.03□□□□□ -0.48
Col6a3E9PWQ3 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a3E9PWQ3 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Col6a3E9PWQ3 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Col6a3E9PWQ3 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Col6a3E9PWQ3 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Col6a3E9PWQ3 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Col6a3E9PWQ3 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Col6a3E9PWQ3 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Col6a3E9PWQ3 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Col6a3E9PWQ3 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.48
Col6a3E9PWQ3 Gm1826-201ENSMUST00000118646 1162 ntBASIC12.02□□□□□ -0.48
Col6a3E9PWQ3 Tbc1d24-211ENSMUST00000201583 893 ntTSL 5 BASIC12.02□□□□□ -0.48
Col6a3E9PWQ3 Clec1b-201ENSMUST00000032262 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Col6a3E9PWQ3 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Col6a3E9PWQ3 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC12.02□□□□□ -0.49
Col6a3E9PWQ3 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.02□□□□□ -0.49
Col6a3E9PWQ3 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col6a3E9PWQ3 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col6a3E9PWQ3 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col6a3E9PWQ3 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Col6a3E9PWQ3 Snx10-202ENSMUST00000114439 968 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col6a3E9PWQ3 4930444A19Rik-202ENSMUST00000190007 633 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Col6a3E9PWQ3 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col6a3E9PWQ3 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC12.02□□□□□ -0.49
Col6a3E9PWQ3 AC124503.1-201ENSMUST00000218524 526 ntTSL 3 BASIC12.02□□□□□ -0.49
Col6a3E9PWQ3 Gm46349-201ENSMUST00000219678 917 ntTSL 5 BASIC12.02□□□□□ -0.49
Col6a3E9PWQ3 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Col6a3E9PWQ3 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col6a3E9PWQ3 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Col6a3E9PWQ3 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.02□□□□□ -0.49
Col6a3E9PWQ3 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col6a3E9PWQ3 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.02□□□□□ -0.49
Col6a3E9PWQ3 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col6a3E9PWQ3 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col6a3E9PWQ3 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Col6a3E9PWQ3 4930505M18Rik-201ENSMUST00000175854 1288 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Col6a3E9PWQ3 Gm2594-201ENSMUST00000214774 742 ntBASIC12.01□□□□□ -0.49
Col6a3E9PWQ3 AC164614.1-201ENSMUST00000216038 397 ntBASIC12.01□□□□□ -0.49
Col6a3E9PWQ3 AC161374.2-201ENSMUST00000223662 596 ntBASIC12.01□□□□□ -0.49
Col6a3E9PWQ3 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Col6a3E9PWQ3 Olfr584-201ENSMUST00000098210 964 ntBASIC12.01□□□□□ -0.49
Col6a3E9PWQ3 Teddm3-201ENSMUST00000170665 1346 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Col6a3E9PWQ3 Gm42970-201ENSMUST00000196407 1352 ntBASIC12.01□□□□□ -0.49
Col6a3E9PWQ3 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col6a3E9PWQ3 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col6a3E9PWQ3 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC12.01□□□□□ -0.49
Col6a3E9PWQ3 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Col6a3E9PWQ3 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col6a3E9PWQ3 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms