Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm12887B1AVM1 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Gm12887B1AVM1 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm12887B1AVM1 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm12887B1AVM1 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC10.03□□□□□ -0.8
Gm12887B1AVM1 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm12887B1AVM1 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm12887B1AVM1 Gm15371-201ENSMUST00000117057 784 ntBASIC10.03□□□□□ -0.8
Gm12887B1AVM1 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
Gm12887B1AVM1 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Gm12887B1AVM1 Gm27741-201ENSMUST00000185060 237 ntBASIC10.03□□□□□ -0.8
Gm12887B1AVM1 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Gm12887B1AVM1 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Gm12887B1AVM1 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC10.03□□□□□ -0.8
Gm12887B1AVM1 Gm42913-201ENSMUST00000197936 1853 ntBASIC10.03□□□□□ -0.8
Gm12887B1AVM1 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC10.03□□□□□ -0.8
Gm12887B1AVM1 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Gm12887B1AVM1 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Gm12887B1AVM1 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC10.03□□□□□ -0.8
Gm12887B1AVM1 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC10.03□□□□□ -0.8
Gm12887B1AVM1 Itm2b-204ENSMUST00000228637 783 ntBASIC10.03□□□□□ -0.8
Gm12887B1AVM1 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm12887B1AVM1 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm12887B1AVM1 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Gm12887B1AVM1 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Gm12887B1AVM1 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm12887B1AVM1 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm12887B1AVM1 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm12887B1AVM1 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm12887B1AVM1 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Gm12887B1AVM1 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm12887B1AVM1 Gm2128-201ENSMUST00000108009 2560 ntBASIC10.03□□□□□ -0.8
Gm12887B1AVM1 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm12887B1AVM1 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Gm12887B1AVM1 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm12887B1AVM1 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC10.03□□□□□ -0.8
Gm12887B1AVM1 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm12887B1AVM1 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm12887B1AVM1 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm12887B1AVM1 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm12887B1AVM1 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Gm12887B1AVM1 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC10.02□□□□□ -0.8
Gm12887B1AVM1 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Gm12887B1AVM1 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Gm12887B1AVM1 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.8
Gm12887B1AVM1 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.8
Gm12887B1AVM1 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Gm12887B1AVM1 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Gm12887B1AVM1 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC10.02□□□□□ -0.81
Gm12887B1AVM1 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Gm12887B1AVM1 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Gm12887B1AVM1 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Gm12887B1AVM1 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Gm12887B1AVM1 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC10.02□□□□□ -0.81
Gm12887B1AVM1 Gm14704-201ENSMUST00000120300 874 ntBASIC10.02□□□□□ -0.81
Gm12887B1AVM1 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC10.02□□□□□ -0.81
Gm12887B1AVM1 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC10.02□□□□□ -0.81
Gm12887B1AVM1 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC10.02□□□□□ -0.81
Gm12887B1AVM1 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC10.02□□□□□ -0.81
Gm12887B1AVM1 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC10.02□□□□□ -0.81
Gm12887B1AVM1 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Gm12887B1AVM1 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC10.02□□□□□ -0.81
Gm12887B1AVM1 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Gm12887B1AVM1 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Gm12887B1AVM1 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Gm12887B1AVM1 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Gm12887B1AVM1 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Gm12887B1AVM1 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Gm12887B1AVM1 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Gm12887B1AVM1 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Gm12887B1AVM1 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Gm12887B1AVM1 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Gm12887B1AVM1 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Gm12887B1AVM1 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC10.02□□□□□ -0.81
Gm12887B1AVM1 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Gm12887B1AVM1 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Gm12887B1AVM1 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Gm12887B1AVM1 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Gm12887B1AVM1 Gm15544-201ENSMUST00000118776 1531 ntBASIC10.02□□□□□ -0.81
Gm12887B1AVM1 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC10.02□□□□□ -0.81
Gm12887B1AVM1 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Gm12887B1AVM1 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Gm12887B1AVM1 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Gm12887B1AVM1 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Gm12887B1AVM1 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Gm12887B1AVM1 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Gm12887B1AVM1 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Gm12887B1AVM1 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Gm12887B1AVM1 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Gm12887B1AVM1 Gm42498-201ENSMUST00000199981 1372 ntBASIC10.01□□□□□ -0.81
Gm12887B1AVM1 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
Gm12887B1AVM1 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Gm12887B1AVM1 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Gm12887B1AVM1 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Gm12887B1AVM1 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Gm12887B1AVM1 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Gm12887B1AVM1 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Gm12887B1AVM1 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Gm12887B1AVM1 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Gm12887B1AVM1 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms