Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Chd6A3KFM7 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Chd6A3KFM7 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC9.98□□□□□ -0.81
Chd6A3KFM7 Gm15136-201ENSMUST00000120552 533 ntBASIC9.98□□□□□ -0.81
Chd6A3KFM7 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC9.98□□□□□ -0.81
Chd6A3KFM7 Erg-208ENSMUST00000176345 1222 ntTSL 5 BASIC9.98□□□□□ -0.81
Chd6A3KFM7 Gm6946-201ENSMUST00000182237 987 ntBASIC9.98□□□□□ -0.81
Chd6A3KFM7 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC9.98□□□□□ -0.81
Chd6A3KFM7 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC9.98□□□□□ -0.81
Chd6A3KFM7 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Chd6A3KFM7 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Chd6A3KFM7 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Chd6A3KFM7 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC9.98□□□□□ -0.81
Chd6A3KFM7 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Chd6A3KFM7 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Chd6A3KFM7 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Chd6A3KFM7 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Chd6A3KFM7 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC9.98□□□□□ -0.81
Chd6A3KFM7 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Chd6A3KFM7 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Chd6A3KFM7 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC9.98□□□□□ -0.81
Chd6A3KFM7 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Chd6A3KFM7 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC9.98□□□□□ -0.81
Chd6A3KFM7 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Chd6A3KFM7 Gm11509-201ENSMUST00000117358 325 ntBASIC9.98□□□□□ -0.81
Chd6A3KFM7 2410152P15Rik-201ENSMUST00000137405 871 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Chd6A3KFM7 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Chd6A3KFM7 Gm21577-201ENSMUST00000190823 697 ntBASIC9.98□□□□□ -0.81
Chd6A3KFM7 Gm20802-201ENSMUST00000190832 698 ntBASIC9.98□□□□□ -0.81
Chd6A3KFM7 Nme6-214ENSMUST00000200468 865 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
Chd6A3KFM7 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Chd6A3KFM7 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC9.98□□□□□ -0.81
Chd6A3KFM7 Gm7727-201ENSMUST00000219830 671 ntBASIC9.98□□□□□ -0.81
Chd6A3KFM7 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Chd6A3KFM7 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Chd6A3KFM7 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Chd6A3KFM7 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC9.98□□□□□ -0.81
Chd6A3KFM7 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Chd6A3KFM7 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Chd6A3KFM7 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Chd6A3KFM7 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC9.98□□□□□ -0.81
Chd6A3KFM7 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Chd6A3KFM7 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Chd6A3KFM7 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Chd6A3KFM7 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Chd6A3KFM7 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Chd6A3KFM7 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Chd6A3KFM7 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Chd6A3KFM7 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC9.98□□□□□ -0.81
Chd6A3KFM7 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC9.98□□□□□ -0.81
Chd6A3KFM7 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Chd6A3KFM7 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Chd6A3KFM7 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC9.98□□□□□ -0.81
Chd6A3KFM7 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Chd6A3KFM7 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Chd6A3KFM7 Gm16210-201ENSMUST00000122161 610 ntBASIC9.98□□□□□ -0.81
Chd6A3KFM7 Gm25554-201ENSMUST00000158075 113 ntBASIC9.98□□□□□ -0.81
Chd6A3KFM7 Gm3298-202ENSMUST00000172110 615 ntTSL 5 BASIC9.98□□□□□ -0.81
Chd6A3KFM7 Gm29543-201ENSMUST00000188138 967 ntBASIC9.98□□□□□ -0.81
Chd6A3KFM7 Gm33707-201ENSMUST00000195135 569 ntBASIC9.98□□□□□ -0.81
Chd6A3KFM7 Gm43866-201ENSMUST00000203894 839 ntBASIC9.98□□□□□ -0.81
Chd6A3KFM7 Gm39288-201ENSMUST00000210554 446 ntBASIC9.98□□□□□ -0.81
Chd6A3KFM7 Gm19228-201ENSMUST00000214030 717 ntBASIC9.98□□□□□ -0.81
Chd6A3KFM7 Olfr1335-202ENSMUST00000219094 1148 ntAPPRIS P2 BASIC9.98□□□□□ -0.81
Chd6A3KFM7 AC162932.1-201ENSMUST00000219209 872 ntBASIC9.98□□□□□ -0.81
Chd6A3KFM7 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC9.98□□□□□ -0.81
Chd6A3KFM7 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Chd6A3KFM7 Gm17541-201ENSMUST00000080062 525 ntBASIC9.98□□□□□ -0.81
Chd6A3KFM7 Olfr1335-201ENSMUST00000084313 1148 ntAPPRIS ALT2 BASIC9.98□□□□□ -0.81
Chd6A3KFM7 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Chd6A3KFM7 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Chd6A3KFM7 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Chd6A3KFM7 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Chd6A3KFM7 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Chd6A3KFM7 CT009489.1-201ENSMUST00000227740 1893 ntBASIC9.97□□□□□ -0.81
Chd6A3KFM7 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Chd6A3KFM7 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Chd6A3KFM7 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Chd6A3KFM7 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Chd6A3KFM7 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Chd6A3KFM7 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Chd6A3KFM7 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Chd6A3KFM7 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Chd6A3KFM7 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Chd6A3KFM7 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Chd6A3KFM7 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Chd6A3KFM7 Gm14942-201ENSMUST00000119642 336 ntBASIC9.97□□□□□ -0.81
Chd6A3KFM7 Gm14639-201ENSMUST00000120850 866 ntBASIC9.97□□□□□ -0.81
Chd6A3KFM7 Gm37207-201ENSMUST00000194284 296 ntBASIC9.97□□□□□ -0.81
Chd6A3KFM7 Gm37452-201ENSMUST00000194416 1160 ntBASIC9.97□□□□□ -0.81
Chd6A3KFM7 Cbx3-ps5-201ENSMUST00000091545 544 ntBASIC9.97□□□□□ -0.81
Chd6A3KFM7 Cbx3-ps2-201ENSMUST00000099421 544 ntBASIC9.97□□□□□ -0.81
Chd6A3KFM7 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Chd6A3KFM7 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Chd6A3KFM7 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Chd6A3KFM7 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Chd6A3KFM7 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Chd6A3KFM7 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Chd6A3KFM7 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC9.97□□□□□ -0.81
Chd6A3KFM7 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms