Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn1aA2APX8 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn1aA2APX8 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.95□□□□□ -0.34
Scn1aA2APX8 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn1aA2APX8 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn1aA2APX8 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Scn1aA2APX8 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn1aA2APX8 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.95□□□□□ -0.34
Scn1aA2APX8 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Scn1aA2APX8 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Scn1aA2APX8 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Scn1aA2APX8 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Scn1aA2APX8 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Scn1aA2APX8 Rprl1-201ENSMUST00000158050 327 ntBASIC12.95□□□□□ -0.34
Scn1aA2APX8 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC12.95□□□□□ -0.34
Scn1aA2APX8 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Scn1aA2APX8 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn1aA2APX8 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.95□□□□□ -0.34
Scn1aA2APX8 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Scn1aA2APX8 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Scn1aA2APX8 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Scn1aA2APX8 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn1aA2APX8 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn1aA2APX8 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Scn1aA2APX8 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC12.94□□□□□ -0.34
Scn1aA2APX8 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn1aA2APX8 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.94□□□□□ -0.34
Scn1aA2APX8 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn1aA2APX8 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.94□□□□□ -0.34
Scn1aA2APX8 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Scn1aA2APX8 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn1aA2APX8 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.94□□□□□ -0.34
Scn1aA2APX8 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Scn1aA2APX8 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Scn1aA2APX8 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Scn1aA2APX8 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn1aA2APX8 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn1aA2APX8 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn1aA2APX8 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn1aA2APX8 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn1aA2APX8 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn1aA2APX8 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Scn1aA2APX8 Mir5120-201ENSMUST00000175020 78 ntBASIC12.94□□□□□ -0.34
Scn1aA2APX8 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.94□□□□□ -0.34
Scn1aA2APX8 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC12.94□□□□□ -0.34
Scn1aA2APX8 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn1aA2APX8 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Scn1aA2APX8 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn1aA2APX8 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn1aA2APX8 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Scn1aA2APX8 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.93□□□□□ -0.34
Scn1aA2APX8 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn1aA2APX8 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn1aA2APX8 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn1aA2APX8 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Scn1aA2APX8 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn1aA2APX8 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.93□□□□□ -0.34
Scn1aA2APX8 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC12.93□□□□□ -0.34
Scn1aA2APX8 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC12.93□□□□□ -0.34
Scn1aA2APX8 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Scn1aA2APX8 Gm270-201ENSMUST00000223010 976 ntBASIC12.93□□□□□ -0.34
Scn1aA2APX8 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn1aA2APX8 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn1aA2APX8 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn1aA2APX8 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn1aA2APX8 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn1aA2APX8 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn1aA2APX8 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn1aA2APX8 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Scn1aA2APX8 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn1aA2APX8 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn1aA2APX8 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Scn1aA2APX8 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn1aA2APX8 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn1aA2APX8 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Scn1aA2APX8 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn1aA2APX8 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn1aA2APX8 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn1aA2APX8 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.93□□□□□ -0.34
Scn1aA2APX8 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn1aA2APX8 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn1aA2APX8 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn1aA2APX8 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC12.93□□□□□ -0.34
Scn1aA2APX8 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Scn1aA2APX8 Gm5706-201ENSMUST00000181525 993 ntBASIC12.93□□□□□ -0.34
Scn1aA2APX8 Gm27627-201ENSMUST00000183644 150 ntBASIC12.93□□□□□ -0.34
Scn1aA2APX8 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC12.93□□□□□ -0.34
Scn1aA2APX8 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Scn1aA2APX8 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC12.93□□□□□ -0.34
Scn1aA2APX8 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC12.93□□□□□ -0.34
Scn1aA2APX8 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC12.93□□□□□ -0.34
Scn1aA2APX8 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.93□□□□□ -0.34
Scn1aA2APX8 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn1aA2APX8 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn1aA2APX8 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Scn1aA2APX8 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn1aA2APX8 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn1aA2APX8 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Scn1aA2APX8 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn1aA2APX8 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms