Protein–RNA interactions for Protein: A2AF28

Slc25a53, MCG115034, isoform CRA_c, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc25a53A2AF28 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Slc25a53A2AF28 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Slc25a53A2AF28 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Slc25a53A2AF28 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Slc25a53A2AF28 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Slc25a53A2AF28 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Slc25a53A2AF28 AC116503.1-201ENSMUST00000215445 2192 ntBASIC11.11□□□□□ -0.63
Slc25a53A2AF28 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc25a53A2AF28 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc25a53A2AF28 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc25a53A2AF28 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc25a53A2AF28 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc25a53A2AF28 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Slc25a53A2AF28 AC122197.2-201ENSMUST00000219196 1635 ntBASIC11.11□□□□□ -0.63
Slc25a53A2AF28 Gm13296-201ENSMUST00000117854 997 ntBASIC11.11□□□□□ -0.63
Slc25a53A2AF28 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Slc25a53A2AF28 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC11.11□□□□□ -0.63
Slc25a53A2AF28 Gm8856-201ENSMUST00000185254 1144 ntBASIC11.11□□□□□ -0.63
Slc25a53A2AF28 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC11.11□□□□□ -0.63
Slc25a53A2AF28 Gm9678-201ENSMUST00000198979 1149 ntBASIC11.11□□□□□ -0.63
Slc25a53A2AF28 Gm44958-201ENSMUST00000203734 736 ntBASIC11.11□□□□□ -0.63
Slc25a53A2AF28 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Slc25a53A2AF28 Gm19187-201ENSMUST00000206781 892 ntBASIC11.11□□□□□ -0.63
Slc25a53A2AF28 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11.11□□□□□ -0.63
Slc25a53A2AF28 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc25a53A2AF28 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc25a53A2AF28 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc25a53A2AF28 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc25a53A2AF28 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc25a53A2AF28 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
Slc25a53A2AF28 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc25a53A2AF28 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Slc25a53A2AF28 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Slc25a53A2AF28 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Slc25a53A2AF28 Gm43908-201ENSMUST00000205074 1472 ntBASIC11.11□□□□□ -0.63
Slc25a53A2AF28 AC113441.2-201ENSMUST00000221538 1468 ntBASIC11.11□□□□□ -0.63
Slc25a53A2AF28 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Slc25a53A2AF28 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc25a53A2AF28 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc25a53A2AF28 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.11□□□□□ -0.63
Slc25a53A2AF28 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Slc25a53A2AF28 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc25a53A2AF28 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc25a53A2AF28 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Slc25a53A2AF28 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc25a53A2AF28 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Slc25a53A2AF28 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc25a53A2AF28 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Slc25a53A2AF28 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Slc25a53A2AF28 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Slc25a53A2AF28 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.1□□□□□ -0.63
Slc25a53A2AF28 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC11.1□□□□□ -0.63
Slc25a53A2AF28 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Slc25a53A2AF28 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Slc25a53A2AF28 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.1□□□□□ -0.63
Slc25a53A2AF28 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Slc25a53A2AF28 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Slc25a53A2AF28 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Slc25a53A2AF28 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Slc25a53A2AF28 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Slc25a53A2AF28 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Slc25a53A2AF28 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Slc25a53A2AF28 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Slc25a53A2AF28 Gm37648-201ENSMUST00000192072 2563 ntBASIC11.1□□□□□ -0.63
Slc25a53A2AF28 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Slc25a53A2AF28 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Slc25a53A2AF28 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
Slc25a53A2AF28 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Slc25a53A2AF28 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Slc25a53A2AF28 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC11.1□□□□□ -0.63
Slc25a53A2AF28 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
Slc25a53A2AF28 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC11.1□□□□□ -0.63
Slc25a53A2AF28 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Slc25a53A2AF28 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.1□□□□□ -0.63
Slc25a53A2AF28 Gm12997-201ENSMUST00000120207 640 ntBASIC11.1□□□□□ -0.63
Slc25a53A2AF28 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC11.1□□□□□ -0.63
Slc25a53A2AF28 Gm6963-201ENSMUST00000147879 379 ntBASIC11.1□□□□□ -0.63
Slc25a53A2AF28 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Slc25a53A2AF28 Gm32999-201ENSMUST00000192693 562 ntBASIC11.1□□□□□ -0.63
Slc25a53A2AF28 Gm37466-201ENSMUST00000195692 652 ntBASIC11.1□□□□□ -0.63
Slc25a53A2AF28 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Slc25a53A2AF28 Gm7619-201ENSMUST00000210649 1282 ntBASIC11.1□□□□□ -0.63
Slc25a53A2AF28 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC11.1□□□□□ -0.63
Slc25a53A2AF28 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Slc25a53A2AF28 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Slc25a53A2AF28 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC11.1□□□□□ -0.63
Slc25a53A2AF28 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
Slc25a53A2AF28 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Slc25a53A2AF28 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Slc25a53A2AF28 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Slc25a53A2AF28 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Slc25a53A2AF28 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Slc25a53A2AF28 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Slc25a53A2AF28 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Slc25a53A2AF28 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Slc25a53A2AF28 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Slc25a53A2AF28 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Slc25a53A2AF28 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Slc25a53A2AF28 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Slc25a53A2AF28 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms