Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trav12d-1A0N8R0 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC9.98□□□□□ -0.81
Trav12d-1A0N8R0 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav12d-1A0N8R0 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav12d-1A0N8R0 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav12d-1A0N8R0 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav12d-1A0N8R0 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC9.98□□□□□ -0.81
Trav12d-1A0N8R0 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav12d-1A0N8R0 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav12d-1A0N8R0 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav12d-1A0N8R0 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trav12d-1A0N8R0 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trav12d-1A0N8R0 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav12d-1A0N8R0 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC9.98□□□□□ -0.81
Trav12d-1A0N8R0 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav12d-1A0N8R0 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav12d-1A0N8R0 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav12d-1A0N8R0 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav12d-1A0N8R0 Gm7537-201ENSMUST00000221660 1414 ntBASIC9.98□□□□□ -0.81
Trav12d-1A0N8R0 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC9.98□□□□□ -0.81
Trav12d-1A0N8R0 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC9.98□□□□□ -0.81
Trav12d-1A0N8R0 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav12d-1A0N8R0 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav12d-1A0N8R0 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Trav12d-1A0N8R0 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav12d-1A0N8R0 Gm42706-201ENSMUST00000199733 1910 ntBASIC9.97□□□□□ -0.81
Trav12d-1A0N8R0 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav12d-1A0N8R0 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav12d-1A0N8R0 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Trav12d-1A0N8R0 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav12d-1A0N8R0 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav12d-1A0N8R0 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Trav12d-1A0N8R0 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav12d-1A0N8R0 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav12d-1A0N8R0 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC9.97□□□□□ -0.81
Trav12d-1A0N8R0 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav12d-1A0N8R0 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav12d-1A0N8R0 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav12d-1A0N8R0 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav12d-1A0N8R0 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav12d-1A0N8R0 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav12d-1A0N8R0 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav12d-1A0N8R0 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav12d-1A0N8R0 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav12d-1A0N8R0 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC9.97□□□□□ -0.81
Trav12d-1A0N8R0 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC9.97□□□□□ -0.81
Trav12d-1A0N8R0 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC9.97□□□□□ -0.81
Trav12d-1A0N8R0 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav12d-1A0N8R0 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav12d-1A0N8R0 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC9.97□□□□□ -0.81
Trav12d-1A0N8R0 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC9.97□□□□□ -0.81
Trav12d-1A0N8R0 Gm4034-201ENSMUST00000187674 480 ntBASIC9.97□□□□□ -0.81
Trav12d-1A0N8R0 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC9.97□□□□□ -0.81
Trav12d-1A0N8R0 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC9.97□□□□□ -0.81
Trav12d-1A0N8R0 Gm32025-201ENSMUST00000217960 307 ntBASIC9.97□□□□□ -0.81
Trav12d-1A0N8R0 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav12d-1A0N8R0 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav12d-1A0N8R0 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav12d-1A0N8R0 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC9.97□□□□□ -0.81
Trav12d-1A0N8R0 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav12d-1A0N8R0 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav12d-1A0N8R0 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav12d-1A0N8R0 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav12d-1A0N8R0 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav12d-1A0N8R0 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC9.97□□□□□ -0.81
Trav12d-1A0N8R0 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav12d-1A0N8R0 Ptprm-203ENSMUST00000224091 3773 ntBASIC9.97□□□□□ -0.81
Trav12d-1A0N8R0 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav12d-1A0N8R0 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav12d-1A0N8R0 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav12d-1A0N8R0 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Trav12d-1A0N8R0 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav12d-1A0N8R0 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Trav12d-1A0N8R0 Gm37542-201ENSMUST00000192563 2832 ntBASIC9.97□□□□□ -0.81
Trav12d-1A0N8R0 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav12d-1A0N8R0 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav12d-1A0N8R0 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav12d-1A0N8R0 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Trav12d-1A0N8R0 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav12d-1A0N8R0 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav12d-1A0N8R0 Gm10339-203ENSMUST00000225409 1671 ntBASIC9.96□□□□□ -0.81
Trav12d-1A0N8R0 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav12d-1A0N8R0 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav12d-1A0N8R0 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
Trav12d-1A0N8R0 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC9.96□□□□□ -0.81
Trav12d-1A0N8R0 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
Trav12d-1A0N8R0 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav12d-1A0N8R0 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
Trav12d-1A0N8R0 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC9.96□□□□□ -0.82
Trav12d-1A0N8R0 Gm7488-201ENSMUST00000117148 684 ntBASIC9.96□□□□□ -0.82
Trav12d-1A0N8R0 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Trav12d-1A0N8R0 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC9.96□□□□□ -0.82
Trav12d-1A0N8R0 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC9.96□□□□□ -0.82
Trav12d-1A0N8R0 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav12d-1A0N8R0 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC9.96□□□□□ -0.82
Trav12d-1A0N8R0 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC9.96□□□□□ -0.82
Trav12d-1A0N8R0 Gm9022-201ENSMUST00000182482 992 ntBASIC9.96□□□□□ -0.82
Trav12d-1A0N8R0 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC9.96□□□□□ -0.82
Trav12d-1A0N8R0 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC9.96□□□□□ -0.82
Trav12d-1A0N8R0 Gm28911-201ENSMUST00000188837 117 ntBASIC9.96□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms