Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cfap99A0A140LIX9 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cfap99A0A140LIX9 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cfap99A0A140LIX9 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cfap99A0A140LIX9 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Cfap99A0A140LIX9 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cfap99A0A140LIX9 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cfap99A0A140LIX9 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC14.87□□□□□ -0.03
Cfap99A0A140LIX9 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC14.87□□□□□ -0.03
Cfap99A0A140LIX9 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cfap99A0A140LIX9 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cfap99A0A140LIX9 AC123834.1-201ENSMUST00000225346 2043 ntBASIC14.87□□□□□ -0.03
Cfap99A0A140LIX9 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cfap99A0A140LIX9 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cfap99A0A140LIX9 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Cfap99A0A140LIX9 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Cfap99A0A140LIX9 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC14.87□□□□□ -0.03
Cfap99A0A140LIX9 Gm14263-201ENSMUST00000117955 746 ntBASIC14.87□□□□□ -0.03
Cfap99A0A140LIX9 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cfap99A0A140LIX9 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC14.87□□□□□ -0.03
Cfap99A0A140LIX9 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Cfap99A0A140LIX9 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cfap99A0A140LIX9 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC14.87□□□□□ -0.03
Cfap99A0A140LIX9 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC14.87□□□□□ -0.03
Cfap99A0A140LIX9 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC14.87□□□□□ -0.03
Cfap99A0A140LIX9 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC14.87□□□□□ -0.03
Cfap99A0A140LIX9 AC123665.1-201ENSMUST00000228204 438 ntBASIC14.87□□□□□ -0.03
Cfap99A0A140LIX9 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Cfap99A0A140LIX9 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cfap99A0A140LIX9 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cfap99A0A140LIX9 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cfap99A0A140LIX9 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cfap99A0A140LIX9 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Cfap99A0A140LIX9 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cfap99A0A140LIX9 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cfap99A0A140LIX9 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC14.87□□□□□ -0.03
Cfap99A0A140LIX9 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cfap99A0A140LIX9 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cfap99A0A140LIX9 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC14.87□□□□□ -0.03
Cfap99A0A140LIX9 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cfap99A0A140LIX9 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cfap99A0A140LIX9 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cfap99A0A140LIX9 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cfap99A0A140LIX9 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC14.87□□□□□ -0.03
Cfap99A0A140LIX9 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Cfap99A0A140LIX9 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cfap99A0A140LIX9 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cfap99A0A140LIX9 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cfap99A0A140LIX9 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cfap99A0A140LIX9 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Cfap99A0A140LIX9 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cfap99A0A140LIX9 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cfap99A0A140LIX9 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cfap99A0A140LIX9 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cfap99A0A140LIX9 Gm43417-201ENSMUST00000201586 5207 ntBASIC14.86□□□□□ -0.03
Cfap99A0A140LIX9 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cfap99A0A140LIX9 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cfap99A0A140LIX9 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cfap99A0A140LIX9 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
Cfap99A0A140LIX9 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC14.86□□□□□ -0.03
Cfap99A0A140LIX9 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cfap99A0A140LIX9 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Cfap99A0A140LIX9 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC14.86□□□□□ -0.03
Cfap99A0A140LIX9 Gm12201-201ENSMUST00000120657 1234 ntBASIC14.86□□□□□ -0.03
Cfap99A0A140LIX9 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC14.86□□□□□ -0.03
Cfap99A0A140LIX9 Gm12291-201ENSMUST00000121627 311 ntBASIC14.86□□□□□ -0.03
Cfap99A0A140LIX9 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC14.86□□□□□ -0.03
Cfap99A0A140LIX9 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Cfap99A0A140LIX9 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC14.86□□□□□ -0.03
Cfap99A0A140LIX9 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cfap99A0A140LIX9 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Cfap99A0A140LIX9 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cfap99A0A140LIX9 Gm38092-201ENSMUST00000195600 653 ntBASIC14.86□□□□□ -0.03
Cfap99A0A140LIX9 Gm45925-201ENSMUST00000218882 744 ntBASIC14.86□□□□□ -0.03
Cfap99A0A140LIX9 AC166095.1-201ENSMUST00000223731 1241 ntBASIC14.86□□□□□ -0.03
Cfap99A0A140LIX9 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cfap99A0A140LIX9 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cfap99A0A140LIX9 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cfap99A0A140LIX9 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cfap99A0A140LIX9 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC14.86□□□□□ -0.03
Cfap99A0A140LIX9 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cfap99A0A140LIX9 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cfap99A0A140LIX9 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC14.86□□□□□ -0.03
Cfap99A0A140LIX9 Crry-ps-201ENSMUST00000079090 1309 ntBASIC14.86□□□□□ -0.03
Cfap99A0A140LIX9 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cfap99A0A140LIX9 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cfap99A0A140LIX9 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cfap99A0A140LIX9 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cfap99A0A140LIX9 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cfap99A0A140LIX9 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Cfap99A0A140LIX9 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cfap99A0A140LIX9 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cfap99A0A140LIX9 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cfap99A0A140LIX9 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC14.85□□□□□ -0.03
Cfap99A0A140LIX9 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
Cfap99A0A140LIX9 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cfap99A0A140LIX9 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cfap99A0A140LIX9 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cfap99A0A140LIX9 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cfap99A0A140LIX9 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms