Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC9.44□□□□□ -0.9
Trav3n-3A0A0G2JEM0 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trav3n-3A0A0G2JEM0 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC9.44□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC9.44□□□□□ -0.9
Trav3n-3A0A0G2JEM0 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav3n-3A0A0G2JEM0 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav3n-3A0A0G2JEM0 AC159621.2-201ENSMUST00000223519 1326 ntBASIC9.44□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Gm26660-202ENSMUST00000223620 4112 ntBASIC9.44□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Gm29100-201ENSMUST00000187564 4410 ntBASIC9.44□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC9.44□□□□□ -0.9
Trav3n-3A0A0G2JEM0 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC9.44□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC9.44□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav3n-3A0A0G2JEM0 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC9.43□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav3n-3A0A0G2JEM0 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC9.43□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav3n-3A0A0G2JEM0 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav3n-3A0A0G2JEM0 AC096628.2-201ENSMUST00000225443 1413 ntBASIC9.43□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC9.43□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC9.43□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Gm37277-201ENSMUST00000194052 1111 ntBASIC9.43□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav3n-3A0A0G2JEM0 AC126408.1-201ENSMUST00000225184 523 ntBASIC9.43□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Htr2c-202ENSMUST00000096299 4883 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC9.43□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC9.43□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC9.42□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC9.42□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC9.42□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Gm9025-201ENSMUST00000122415 1575 ntBASIC9.42□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trav3n-3A0A0G2JEM0 AC113060.1-201ENSMUST00000225689 1573 ntBASIC9.42□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC9.42□□□□□ -0.9
Trav3n-3A0A0G2JEM0 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Gm11524-201ENSMUST00000119349 807 ntBASIC9.42□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC9.42□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Gm5279-201ENSMUST00000199575 745 ntBASIC9.42□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trav3n-3A0A0G2JEM0 AC173210.1-201ENSMUST00000222341 1131 ntBASIC9.42□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms