Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav6n-6A0A075B6B2 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC9.3□□□□□ -0.92
Trav6n-6A0A075B6B2 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav6n-6A0A075B6B2 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav6n-6A0A075B6B2 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Trav6n-6A0A075B6B2 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav6n-6A0A075B6B2 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav6n-6A0A075B6B2 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Trav6n-6A0A075B6B2 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Trav6n-6A0A075B6B2 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
Trav6n-6A0A075B6B2 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC9.3□□□□□ -0.92
Trav6n-6A0A075B6B2 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC9.3□□□□□ -0.92
Trav6n-6A0A075B6B2 Gm12490-201ENSMUST00000120255 560 ntBASIC9.3□□□□□ -0.92
Trav6n-6A0A075B6B2 Gm15806-201ENSMUST00000120696 955 ntBASIC9.3□□□□□ -0.92
Trav6n-6A0A075B6B2 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Trav6n-6A0A075B6B2 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC9.3□□□□□ -0.92
Trav6n-6A0A075B6B2 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC9.3□□□□□ -0.92
Trav6n-6A0A075B6B2 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Trav6n-6A0A075B6B2 Gm6473-201ENSMUST00000188572 1210 ntBASIC9.3□□□□□ -0.92
Trav6n-6A0A075B6B2 Gm45384-201ENSMUST00000210451 277 ntBASIC9.3□□□□□ -0.92
Trav6n-6A0A075B6B2 AC073947.2-201ENSMUST00000215888 1130 ntBASIC9.3□□□□□ -0.92
Trav6n-6A0A075B6B2 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC9.3□□□□□ -0.92
Trav6n-6A0A075B6B2 AC140375.2-201ENSMUST00000225283 584 ntBASIC9.3□□□□□ -0.92
Trav6n-6A0A075B6B2 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav6n-6A0A075B6B2 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Trav6n-6A0A075B6B2 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Trav6n-6A0A075B6B2 Gm16372-201ENSMUST00000073088 450 ntBASIC9.3□□□□□ -0.92
Trav6n-6A0A075B6B2 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav6n-6A0A075B6B2 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav6n-6A0A075B6B2 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav6n-6A0A075B6B2 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC9.3□□□□□ -0.92
Trav6n-6A0A075B6B2 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Trav6n-6A0A075B6B2 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
Trav6n-6A0A075B6B2 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav6n-6A0A075B6B2 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC9.3□□□□□ -0.92
Trav6n-6A0A075B6B2 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav6n-6A0A075B6B2 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Trav6n-6A0A075B6B2 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav6n-6A0A075B6B2 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC9.3□□□□□ -0.92
Trav6n-6A0A075B6B2 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav6n-6A0A075B6B2 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav6n-6A0A075B6B2 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav6n-6A0A075B6B2 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav6n-6A0A075B6B2 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC9.3□□□□□ -0.92
Trav6n-6A0A075B6B2 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC9.3□□□□□ -0.92
Trav6n-6A0A075B6B2 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Trav6n-6A0A075B6B2 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav6n-6A0A075B6B2 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC9.3□□□□□ -0.92
Trav6n-6A0A075B6B2 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Trav6n-6A0A075B6B2 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav6n-6A0A075B6B2 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Trav6n-6A0A075B6B2 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC9.29□□□□□ -0.92
Trav6n-6A0A075B6B2 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav6n-6A0A075B6B2 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav6n-6A0A075B6B2 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav6n-6A0A075B6B2 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav6n-6A0A075B6B2 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Trav6n-6A0A075B6B2 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Trav6n-6A0A075B6B2 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav6n-6A0A075B6B2 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav6n-6A0A075B6B2 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Trav6n-6A0A075B6B2 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Trav6n-6A0A075B6B2 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC9.29□□□□□ -0.92
Trav6n-6A0A075B6B2 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav6n-6A0A075B6B2 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC9.29□□□□□ -0.92
Trav6n-6A0A075B6B2 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav6n-6A0A075B6B2 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav6n-6A0A075B6B2 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC9.29□□□□□ -0.92
Trav6n-6A0A075B6B2 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Trav6n-6A0A075B6B2 Gm12928-201ENSMUST00000117115 573 ntBASIC9.29□□□□□ -0.92
Trav6n-6A0A075B6B2 Gm12537-201ENSMUST00000119266 1002 ntBASIC9.29□□□□□ -0.92
Trav6n-6A0A075B6B2 Gm12070-201ENSMUST00000119551 1002 ntBASIC9.29□□□□□ -0.92
Trav6n-6A0A075B6B2 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC9.29□□□□□ -0.92
Trav6n-6A0A075B6B2 Gm12671-201ENSMUST00000119978 1002 ntBASIC9.29□□□□□ -0.92
Trav6n-6A0A075B6B2 Gm13292-201ENSMUST00000120014 1000 ntBASIC9.29□□□□□ -0.92
Trav6n-6A0A075B6B2 Gm12403-201ENSMUST00000121384 959 ntBASIC9.29□□□□□ -0.92
Trav6n-6A0A075B6B2 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Trav6n-6A0A075B6B2 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Trav6n-6A0A075B6B2 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Trav6n-6A0A075B6B2 Gm10359-201ENSMUST00000180167 1002 ntBASIC9.29□□□□□ -0.92
Trav6n-6A0A075B6B2 Gm12033-201ENSMUST00000180654 1002 ntBASIC9.29□□□□□ -0.92
Trav6n-6A0A075B6B2 Gm5559-201ENSMUST00000180755 1002 ntBASIC9.29□□□□□ -0.92
Trav6n-6A0A075B6B2 Gm4335-201ENSMUST00000182581 1004 ntBASIC9.29□□□□□ -0.92
Trav6n-6A0A075B6B2 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Trav6n-6A0A075B6B2 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC9.29□□□□□ -0.92
Trav6n-6A0A075B6B2 AC138604.1-201ENSMUST00000226969 739 ntBASIC9.29□□□□□ -0.92
Trav6n-6A0A075B6B2 Itm2b-204ENSMUST00000228637 783 ntBASIC9.29□□□□□ -0.92
Trav6n-6A0A075B6B2 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav6n-6A0A075B6B2 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav6n-6A0A075B6B2 Rn7sk-201ENSMUST00000083103 331 ntBASIC9.29□□□□□ -0.92
Trav6n-6A0A075B6B2 Gm26315-201ENSMUST00000083890 321 ntBASIC9.29□□□□□ -0.92
Trav6n-6A0A075B6B2 Gm5356-201ENSMUST00000093326 615 ntBASIC9.29□□□□□ -0.92
Trav6n-6A0A075B6B2 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Trav6n-6A0A075B6B2 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav6n-6A0A075B6B2 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Trav6n-6A0A075B6B2 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Trav6n-6A0A075B6B2 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Trav6n-6A0A075B6B2 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav6n-6A0A075B6B2 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav6n-6A0A075B6B2 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms