Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
PdfS4R2K0 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
PdfS4R2K0 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
PdfS4R2K0 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
PdfS4R2K0 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
PdfS4R2K0 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
PdfS4R2K0 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
PdfS4R2K0 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC9.58□□□□□ -0.88
PdfS4R2K0 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
PdfS4R2K0 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
PdfS4R2K0 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
PdfS4R2K0 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
PdfS4R2K0 Gm2238-201ENSMUST00000192074 3669 ntBASIC9.58□□□□□ -0.88
PdfS4R2K0 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
PdfS4R2K0 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
PdfS4R2K0 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC9.57□□□□□ -0.88
PdfS4R2K0 Gm37849-201ENSMUST00000194722 1881 ntBASIC9.57□□□□□ -0.88
PdfS4R2K0 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC9.57□□□□□ -0.88
PdfS4R2K0 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
PdfS4R2K0 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
PdfS4R2K0 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
PdfS4R2K0 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
PdfS4R2K0 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
PdfS4R2K0 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
PdfS4R2K0 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
PdfS4R2K0 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
PdfS4R2K0 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
PdfS4R2K0 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
PdfS4R2K0 Gm45532-201ENSMUST00000210342 3620 ntBASIC9.57□□□□□ -0.88
PdfS4R2K0 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
PdfS4R2K0 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
PdfS4R2K0 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
PdfS4R2K0 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
PdfS4R2K0 Gm11478-201ENSMUST00000117851 599 ntBASIC9.57□□□□□ -0.88
PdfS4R2K0 Gm15240-201ENSMUST00000118156 720 ntBASIC9.57□□□□□ -0.88
PdfS4R2K0 Gm14730-201ENSMUST00000122378 1045 ntBASIC9.57□□□□□ -0.88
PdfS4R2K0 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
PdfS4R2K0 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
PdfS4R2K0 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC9.57□□□□□ -0.88
PdfS4R2K0 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
PdfS4R2K0 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC9.57□□□□□ -0.88
PdfS4R2K0 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC9.57□□□□□ -0.88
PdfS4R2K0 Gm7498-201ENSMUST00000203282 1084 ntBASIC9.57□□□□□ -0.88
PdfS4R2K0 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
PdfS4R2K0 AC138604.1-201ENSMUST00000226969 739 ntBASIC9.57□□□□□ -0.88
PdfS4R2K0 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
PdfS4R2K0 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
PdfS4R2K0 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
PdfS4R2K0 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
PdfS4R2K0 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
PdfS4R2K0 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC9.57□□□□□ -0.88
PdfS4R2K0 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
PdfS4R2K0 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
PdfS4R2K0 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
PdfS4R2K0 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
PdfS4R2K0 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC9.57□□□□□ -0.88
PdfS4R2K0 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC9.57□□□□□ -0.88
PdfS4R2K0 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
PdfS4R2K0 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
PdfS4R2K0 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
PdfS4R2K0 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
PdfS4R2K0 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC9.57□□□□□ -0.88
PdfS4R2K0 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
PdfS4R2K0 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
PdfS4R2K0 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
PdfS4R2K0 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
PdfS4R2K0 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
PdfS4R2K0 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
PdfS4R2K0 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
PdfS4R2K0 AC131586.1-201ENSMUST00000228844 2964 ntBASIC9.57□□□□□ -0.88
PdfS4R2K0 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
PdfS4R2K0 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
PdfS4R2K0 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
PdfS4R2K0 AC154262.2-202ENSMUST00000225158 1331 ntBASIC9.56□□□□□ -0.88
PdfS4R2K0 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
PdfS4R2K0 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
PdfS4R2K0 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
PdfS4R2K0 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
PdfS4R2K0 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC9.56□□□□□ -0.88
PdfS4R2K0 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
PdfS4R2K0 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC9.56□□□□□ -0.88
PdfS4R2K0 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
PdfS4R2K0 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
PdfS4R2K0 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC9.56□□□□□ -0.88
PdfS4R2K0 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
PdfS4R2K0 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
PdfS4R2K0 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
PdfS4R2K0 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC9.56□□□□□ -0.88
PdfS4R2K0 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC9.56□□□□□ -0.88
PdfS4R2K0 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
PdfS4R2K0 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
PdfS4R2K0 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
PdfS4R2K0 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC9.56□□□□□ -0.88
PdfS4R2K0 AC123738.2-201ENSMUST00000223791 1899 ntBASIC9.56□□□□□ -0.88
PdfS4R2K0 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
PdfS4R2K0 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
PdfS4R2K0 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
PdfS4R2K0 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
PdfS4R2K0 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
PdfS4R2K0 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms