Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lhx9Q9WUH2 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Lhx9Q9WUH2 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lhx9Q9WUH2 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Lhx9Q9WUH2 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lhx9Q9WUH2 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lhx9Q9WUH2 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Lhx9Q9WUH2 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Lhx9Q9WUH2 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lhx9Q9WUH2 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lhx9Q9WUH2 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lhx9Q9WUH2 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lhx9Q9WUH2 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Lhx9Q9WUH2 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lhx9Q9WUH2 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Lhx9Q9WUH2 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lhx9Q9WUH2 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lhx9Q9WUH2 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lhx9Q9WUH2 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.83□□□□□ -0.52
Lhx9Q9WUH2 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lhx9Q9WUH2 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Lhx9Q9WUH2 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Lhx9Q9WUH2 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lhx9Q9WUH2 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Lhx9Q9WUH2 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lhx9Q9WUH2 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Lhx9Q9WUH2 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lhx9Q9WUH2 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lhx9Q9WUH2 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Lhx9Q9WUH2 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Lhx9Q9WUH2 Gm26361-201ENSMUST00000158868 186 ntBASIC11.83□□□□□ -0.52
Lhx9Q9WUH2 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lhx9Q9WUH2 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.83□□□□□ -0.52
Lhx9Q9WUH2 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.83□□□□□ -0.52
Lhx9Q9WUH2 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Lhx9Q9WUH2 Gm39404-201ENSMUST00000216350 313 ntBASIC11.83□□□□□ -0.52
Lhx9Q9WUH2 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC11.83□□□□□ -0.52
Lhx9Q9WUH2 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.83□□□□□ -0.52
Lhx9Q9WUH2 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lhx9Q9WUH2 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lhx9Q9WUH2 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lhx9Q9WUH2 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Lhx9Q9WUH2 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.83□□□□□ -0.52
Lhx9Q9WUH2 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Lhx9Q9WUH2 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Lhx9Q9WUH2 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lhx9Q9WUH2 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Lhx9Q9WUH2 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lhx9Q9WUH2 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Lhx9Q9WUH2 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Lhx9Q9WUH2 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lhx9Q9WUH2 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Lhx9Q9WUH2 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lhx9Q9WUH2 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lhx9Q9WUH2 Gm4735-201ENSMUST00000138679 1302 ntBASIC11.83□□□□□ -0.52
Lhx9Q9WUH2 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.83□□□□□ -0.52
Lhx9Q9WUH2 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Lhx9Q9WUH2 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lhx9Q9WUH2 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.83□□□□□ -0.52
Lhx9Q9WUH2 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lhx9Q9WUH2 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Lhx9Q9WUH2 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lhx9Q9WUH2 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lhx9Q9WUH2 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lhx9Q9WUH2 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Lhx9Q9WUH2 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.82□□□□□ -0.52
Lhx9Q9WUH2 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lhx9Q9WUH2 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.82□□□□□ -0.52
Lhx9Q9WUH2 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.82□□□□□ -0.52
Lhx9Q9WUH2 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lhx9Q9WUH2 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lhx9Q9WUH2 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lhx9Q9WUH2 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Lhx9Q9WUH2 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lhx9Q9WUH2 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lhx9Q9WUH2 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Lhx9Q9WUH2 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Lhx9Q9WUH2 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.82□□□□□ -0.52
Lhx9Q9WUH2 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Lhx9Q9WUH2 Gm12314-201ENSMUST00000118104 538 ntBASIC11.82□□□□□ -0.52
Lhx9Q9WUH2 Gm11439-201ENSMUST00000118598 409 ntBASIC11.82□□□□□ -0.52
Lhx9Q9WUH2 Gm14277-201ENSMUST00000121195 360 ntBASIC11.82□□□□□ -0.52
Lhx9Q9WUH2 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lhx9Q9WUH2 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Lhx9Q9WUH2 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lhx9Q9WUH2 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.82□□□□□ -0.52
Lhx9Q9WUH2 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC11.82□□□□□ -0.52
Lhx9Q9WUH2 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Lhx9Q9WUH2 Gm18304-201ENSMUST00000189162 546 ntBASIC11.82□□□□□ -0.52
Lhx9Q9WUH2 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lhx9Q9WUH2 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Lhx9Q9WUH2 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC11.82□□□□□ -0.52
Lhx9Q9WUH2 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC11.82□□□□□ -0.52
Lhx9Q9WUH2 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lhx9Q9WUH2 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lhx9Q9WUH2 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Lhx9Q9WUH2 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Lhx9Q9WUH2 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lhx9Q9WUH2 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Lhx9Q9WUH2 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms