Protein–RNA interactions for Protein: Q9QZS2

Rnf4, E3 ubiquitin-protein ligase RNF4, mousemouse

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4Q9QZS2 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Rnf4Q9QZS2 Gm5279-201ENSMUST00000199575 745 ntBASIC12.56□□□□□ -0.4
Rnf4Q9QZS2 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.56□□□□□ -0.4
Rnf4Q9QZS2 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.56□□□□□ -0.4
Rnf4Q9QZS2 AC140397.2-201ENSMUST00000224213 834 ntBASIC12.56□□□□□ -0.4
Rnf4Q9QZS2 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf4Q9QZS2 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf4Q9QZS2 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf4Q9QZS2 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf4Q9QZS2 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf4Q9QZS2 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf4Q9QZS2 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf4Q9QZS2 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf4Q9QZS2 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Rnf4Q9QZS2 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Rnf4Q9QZS2 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.56□□□□□ -0.4
Rnf4Q9QZS2 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf4Q9QZS2 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Rnf4Q9QZS2 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf4Q9QZS2 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf4Q9QZS2 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf4Q9QZS2 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf4Q9QZS2 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf4Q9QZS2 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Rnf4Q9QZS2 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Rnf4Q9QZS2 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf4Q9QZS2 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf4Q9QZS2 Gm38055-201ENSMUST00000195353 2217 ntBASIC12.56□□□□□ -0.4
Rnf4Q9QZS2 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf4Q9QZS2 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf4Q9QZS2 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf4Q9QZS2 Cog3-203ENSMUST00000227473 4197 ntBASIC12.55□□□□□ -0.4
Rnf4Q9QZS2 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf4Q9QZS2 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.55□□□□□ -0.4
Rnf4Q9QZS2 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf4Q9QZS2 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf4Q9QZS2 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf4Q9QZS2 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf4Q9QZS2 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf4Q9QZS2 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf4Q9QZS2 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.55□□□□□ -0.4
Rnf4Q9QZS2 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Rnf4Q9QZS2 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf4Q9QZS2 Gm11424-201ENSMUST00000121929 829 ntBASIC12.55□□□□□ -0.4
Rnf4Q9QZS2 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.55□□□□□ -0.4
Rnf4Q9QZS2 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.55□□□□□ -0.4
Rnf4Q9QZS2 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Rnf4Q9QZS2 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.55□□□□□ -0.4
Rnf4Q9QZS2 Gm44069-201ENSMUST00000204898 506 ntBASIC12.55□□□□□ -0.4
Rnf4Q9QZS2 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC12.55□□□□□ -0.4
Rnf4Q9QZS2 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.55□□□□□ -0.4
Rnf4Q9QZS2 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf4Q9QZS2 Gm5626-201ENSMUST00000222151 1058 ntBASIC12.55□□□□□ -0.4
Rnf4Q9QZS2 CT025535.1-201ENSMUST00000227172 491 ntBASIC12.55□□□□□ -0.4
Rnf4Q9QZS2 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf4Q9QZS2 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf4Q9QZS2 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf4Q9QZS2 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf4Q9QZS2 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf4Q9QZS2 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf4Q9QZS2 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.55□□□□□ -0.4
Rnf4Q9QZS2 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf4Q9QZS2 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.55□□□□□ -0.4
Rnf4Q9QZS2 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf4Q9QZS2 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf4Q9QZS2 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf4Q9QZS2 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf4Q9QZS2 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.55□□□□□ -0.4
Rnf4Q9QZS2 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.55□□□□□ -0.4
Rnf4Q9QZS2 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf4Q9QZS2 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf4Q9QZS2 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.55□□□□□ -0.4
Rnf4Q9QZS2 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf4Q9QZS2 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.55□□□□□ -0.4
Rnf4Q9QZS2 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Rnf4Q9QZS2 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.54□□□□□ -0.4
Rnf4Q9QZS2 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf4Q9QZS2 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf4Q9QZS2 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf4Q9QZS2 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf4Q9QZS2 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf4Q9QZS2 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf4Q9QZS2 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Rnf4Q9QZS2 BC043934-202ENSMUST00000185694 2356 ntBASIC12.54□□□□□ -0.4
Rnf4Q9QZS2 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf4Q9QZS2 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Rnf4Q9QZS2 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf4Q9QZS2 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.54□□□□□ -0.4
Rnf4Q9QZS2 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC12.54□□□□□ -0.4
Rnf4Q9QZS2 Gm38223-201ENSMUST00000194484 695 ntBASIC12.54□□□□□ -0.4
Rnf4Q9QZS2 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf4Q9QZS2 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC12.54□□□□□ -0.4
Rnf4Q9QZS2 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf4Q9QZS2 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf4Q9QZS2 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf4Q9QZS2 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf4Q9QZS2 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf4Q9QZS2 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf4Q9QZS2 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf4Q9QZS2 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms