Protein–RNA interactions for Protein: Q9QXZ7

Nr2e3, Photoreceptor-specific nuclear receptor, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr2e3Q9QXZ7 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nr2e3Q9QXZ7 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nr2e3Q9QXZ7 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nr2e3Q9QXZ7 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nr2e3Q9QXZ7 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Nr2e3Q9QXZ7 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
Nr2e3Q9QXZ7 Gm22323-201ENSMUST00000103832 109 ntBASIC14.05□□□□□ -0.16
Nr2e3Q9QXZ7 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC14.05□□□□□ -0.16
Nr2e3Q9QXZ7 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC14.05□□□□□ -0.16
Nr2e3Q9QXZ7 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nr2e3Q9QXZ7 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nr2e3Q9QXZ7 Gm7584-201ENSMUST00000175829 940 ntBASIC14.05□□□□□ -0.16
Nr2e3Q9QXZ7 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC14.05□□□□□ -0.16
Nr2e3Q9QXZ7 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nr2e3Q9QXZ7 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nr2e3Q9QXZ7 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nr2e3Q9QXZ7 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
Nr2e3Q9QXZ7 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nr2e3Q9QXZ7 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nr2e3Q9QXZ7 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nr2e3Q9QXZ7 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nr2e3Q9QXZ7 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nr2e3Q9QXZ7 Gm13142-201ENSMUST00000117213 1453 ntBASIC14.05□□□□□ -0.16
Nr2e3Q9QXZ7 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nr2e3Q9QXZ7 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Nr2e3Q9QXZ7 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nr2e3Q9QXZ7 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nr2e3Q9QXZ7 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Nr2e3Q9QXZ7 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nr2e3Q9QXZ7 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Nr2e3Q9QXZ7 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nr2e3Q9QXZ7 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nr2e3Q9QXZ7 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Nr2e3Q9QXZ7 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Nr2e3Q9QXZ7 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nr2e3Q9QXZ7 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nr2e3Q9QXZ7 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nr2e3Q9QXZ7 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Nr2e3Q9QXZ7 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nr2e3Q9QXZ7 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC14.04□□□□□ -0.16
Nr2e3Q9QXZ7 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nr2e3Q9QXZ7 AC098716.1-201ENSMUST00000213527 703 ntBASIC14.04□□□□□ -0.16
Nr2e3Q9QXZ7 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC14.04□□□□□ -0.16
Nr2e3Q9QXZ7 AC126253.1-202ENSMUST00000226732 835 ntBASIC14.04□□□□□ -0.16
Nr2e3Q9QXZ7 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nr2e3Q9QXZ7 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Nr2e3Q9QXZ7 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nr2e3Q9QXZ7 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Nr2e3Q9QXZ7 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nr2e3Q9QXZ7 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nr2e3Q9QXZ7 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nr2e3Q9QXZ7 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nr2e3Q9QXZ7 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nr2e3Q9QXZ7 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nr2e3Q9QXZ7 AC122197.2-201ENSMUST00000219196 1635 ntBASIC14.04□□□□□ -0.16
Nr2e3Q9QXZ7 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nr2e3Q9QXZ7 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nr2e3Q9QXZ7 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nr2e3Q9QXZ7 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nr2e3Q9QXZ7 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nr2e3Q9QXZ7 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC14.03□□□□□ -0.16
Nr2e3Q9QXZ7 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nr2e3Q9QXZ7 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nr2e3Q9QXZ7 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nr2e3Q9QXZ7 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nr2e3Q9QXZ7 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Nr2e3Q9QXZ7 Gm15547-201ENSMUST00000122152 333 ntBASIC14.03□□□□□ -0.16
Nr2e3Q9QXZ7 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nr2e3Q9QXZ7 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC14.03□□□□□ -0.16
Nr2e3Q9QXZ7 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC14.03□□□□□ -0.16
Nr2e3Q9QXZ7 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nr2e3Q9QXZ7 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nr2e3Q9QXZ7 Gm37259-201ENSMUST00000193903 849 ntBASIC14.03□□□□□ -0.16
Nr2e3Q9QXZ7 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC14.03□□□□□ -0.16
Nr2e3Q9QXZ7 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Nr2e3Q9QXZ7 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nr2e3Q9QXZ7 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Nr2e3Q9QXZ7 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nr2e3Q9QXZ7 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nr2e3Q9QXZ7 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Nr2e3Q9QXZ7 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Nr2e3Q9QXZ7 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nr2e3Q9QXZ7 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nr2e3Q9QXZ7 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Nr2e3Q9QXZ7 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nr2e3Q9QXZ7 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nr2e3Q9QXZ7 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nr2e3Q9QXZ7 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nr2e3Q9QXZ7 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nr2e3Q9QXZ7 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Nr2e3Q9QXZ7 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nr2e3Q9QXZ7 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC14.02□□□□□ -0.16
Nr2e3Q9QXZ7 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Nr2e3Q9QXZ7 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Nr2e3Q9QXZ7 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Nr2e3Q9QXZ7 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
Nr2e3Q9QXZ7 AC160405.1-201ENSMUST00000218207 1545 ntBASIC14.02□□□□□ -0.16
Nr2e3Q9QXZ7 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Nr2e3Q9QXZ7 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nr2e3Q9QXZ7 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms