Protein–RNA interactions for Protein: Q9JIT0

Lmbr1, Limb region 1 protein, mousemouse

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmbr1Q9JIT0 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lmbr1Q9JIT0 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Lmbr1Q9JIT0 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC14.29□□□□□ -0.12
Lmbr1Q9JIT0 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lmbr1Q9JIT0 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lmbr1Q9JIT0 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC14.29□□□□□ -0.12
Lmbr1Q9JIT0 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lmbr1Q9JIT0 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lmbr1Q9JIT0 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lmbr1Q9JIT0 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lmbr1Q9JIT0 Gm13492-201ENSMUST00000119772 665 ntBASIC14.29□□□□□ -0.12
Lmbr1Q9JIT0 Gm38241-201ENSMUST00000192641 898 ntBASIC14.29□□□□□ -0.12
Lmbr1Q9JIT0 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC14.29□□□□□ -0.12
Lmbr1Q9JIT0 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC14.29□□□□□ -0.12
Lmbr1Q9JIT0 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Lmbr1Q9JIT0 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Lmbr1Q9JIT0 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
Lmbr1Q9JIT0 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lmbr1Q9JIT0 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lmbr1Q9JIT0 Gm20633-201ENSMUST00000176742 2831 ntBASIC14.29□□□□□ -0.12
Lmbr1Q9JIT0 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lmbr1Q9JIT0 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Lmbr1Q9JIT0 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lmbr1Q9JIT0 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
Lmbr1Q9JIT0 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lmbr1Q9JIT0 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lmbr1Q9JIT0 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lmbr1Q9JIT0 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lmbr1Q9JIT0 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lmbr1Q9JIT0 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lmbr1Q9JIT0 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lmbr1Q9JIT0 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lmbr1Q9JIT0 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lmbr1Q9JIT0 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lmbr1Q9JIT0 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Lmbr1Q9JIT0 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lmbr1Q9JIT0 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Lmbr1Q9JIT0 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lmbr1Q9JIT0 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lmbr1Q9JIT0 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC14.28□□□□□ -0.12
Lmbr1Q9JIT0 Gm37472-201ENSMUST00000192342 4052 ntBASIC14.28□□□□□ -0.12
Lmbr1Q9JIT0 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Lmbr1Q9JIT0 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lmbr1Q9JIT0 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lmbr1Q9JIT0 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lmbr1Q9JIT0 Gm14760-201ENSMUST00000121831 999 ntBASIC14.28□□□□□ -0.12
Lmbr1Q9JIT0 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC14.28□□□□□ -0.12
Lmbr1Q9JIT0 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Lmbr1Q9JIT0 Gm3756-201ENSMUST00000169182 1355 ntBASIC14.28□□□□□ -0.12
Lmbr1Q9JIT0 Gm7895-201ENSMUST00000187459 1173 ntBASIC14.28□□□□□ -0.12
Lmbr1Q9JIT0 Gm38092-201ENSMUST00000195600 653 ntBASIC14.28□□□□□ -0.12
Lmbr1Q9JIT0 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Lmbr1Q9JIT0 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC14.28□□□□□ -0.12
Lmbr1Q9JIT0 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lmbr1Q9JIT0 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lmbr1Q9JIT0 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lmbr1Q9JIT0 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lmbr1Q9JIT0 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lmbr1Q9JIT0 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lmbr1Q9JIT0 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC14.28□□□□□ -0.12
Lmbr1Q9JIT0 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lmbr1Q9JIT0 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lmbr1Q9JIT0 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lmbr1Q9JIT0 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lmbr1Q9JIT0 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lmbr1Q9JIT0 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lmbr1Q9JIT0 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Lmbr1Q9JIT0 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lmbr1Q9JIT0 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lmbr1Q9JIT0 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Lmbr1Q9JIT0 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Lmbr1Q9JIT0 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lmbr1Q9JIT0 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lmbr1Q9JIT0 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lmbr1Q9JIT0 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lmbr1Q9JIT0 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lmbr1Q9JIT0 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Lmbr1Q9JIT0 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Lmbr1Q9JIT0 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lmbr1Q9JIT0 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC14.27□□□□□ -0.12
Lmbr1Q9JIT0 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lmbr1Q9JIT0 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lmbr1Q9JIT0 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Lmbr1Q9JIT0 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Lmbr1Q9JIT0 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Lmbr1Q9JIT0 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Lmbr1Q9JIT0 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Lmbr1Q9JIT0 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Lmbr1Q9JIT0 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Lmbr1Q9JIT0 Gm15370-201ENSMUST00000117158 253 ntBASIC14.27□□□□□ -0.13
Lmbr1Q9JIT0 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC14.27□□□□□ -0.13
Lmbr1Q9JIT0 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC14.27□□□□□ -0.13
Lmbr1Q9JIT0 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Lmbr1Q9JIT0 Gm5637-201ENSMUST00000153890 1119 ntBASIC14.27□□□□□ -0.13
Lmbr1Q9JIT0 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lmbr1Q9JIT0 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC14.27□□□□□ -0.13
Lmbr1Q9JIT0 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Lmbr1Q9JIT0 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lmbr1Q9JIT0 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lmbr1Q9JIT0 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms