Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm14667-201ENSMUST00000119448 1350 ntBASIC11.72□□□□□ -0.53
Trim39Q9ESN2 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trim39Q9ESN2 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim39Q9ESN2 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim39Q9ESN2 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim39Q9ESN2 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim39Q9ESN2 Gm11618-201ENSMUST00000117946 267 ntBASIC11.72□□□□□ -0.53
Trim39Q9ESN2 Gm11424-201ENSMUST00000121929 829 ntBASIC11.72□□□□□ -0.53
Trim39Q9ESN2 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC11.72□□□□□ -0.53
Trim39Q9ESN2 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trim39Q9ESN2 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim39Q9ESN2 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim39Q9ESN2 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trim39Q9ESN2 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC11.72□□□□□ -0.53
Trim39Q9ESN2 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC11.72□□□□□ -0.53
Trim39Q9ESN2 AC135669.1-202ENSMUST00000216742 540 ntBASIC11.72□□□□□ -0.53
Trim39Q9ESN2 AC110817.1-201ENSMUST00000225706 605 ntBASIC11.72□□□□□ -0.53
Trim39Q9ESN2 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim39Q9ESN2 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim39Q9ESN2 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim39Q9ESN2 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.72□□□□□ -0.53
Trim39Q9ESN2 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim39Q9ESN2 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim39Q9ESN2 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim39Q9ESN2 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trim39Q9ESN2 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim39Q9ESN2 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC11.72□□□□□ -0.53
Trim39Q9ESN2 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trim39Q9ESN2 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trim39Q9ESN2 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.72□□□□□ -0.53
Trim39Q9ESN2 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trim39Q9ESN2 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.72□□□□□ -0.53
Trim39Q9ESN2 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim39Q9ESN2 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trim39Q9ESN2 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trim39Q9ESN2 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC11.71□□□□□ -0.53
Trim39Q9ESN2 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim39Q9ESN2 Gm38273-201ENSMUST00000194987 2382 ntBASIC11.71□□□□□ -0.53
Trim39Q9ESN2 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim39Q9ESN2 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim39Q9ESN2 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim39Q9ESN2 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim39Q9ESN2 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim39Q9ESN2 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim39Q9ESN2 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trim39Q9ESN2 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim39Q9ESN2 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim39Q9ESN2 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim39Q9ESN2 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.71□□□□□ -0.53
Trim39Q9ESN2 AC154404.1-201ENSMUST00000223601 2077 ntBASIC11.71□□□□□ -0.53
Trim39Q9ESN2 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim39Q9ESN2 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Trim39Q9ESN2 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trim39Q9ESN2 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim39Q9ESN2 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC11.71□□□□□ -0.53
Trim39Q9ESN2 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim39Q9ESN2 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Trim39Q9ESN2 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trim39Q9ESN2 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trim39Q9ESN2 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC11.71□□□□□ -0.53
Trim39Q9ESN2 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trim39Q9ESN2 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim39Q9ESN2 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC11.71□□□□□ -0.53
Trim39Q9ESN2 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trim39Q9ESN2 Gm11803-201ENSMUST00000119966 444 ntBASIC11.71□□□□□ -0.53
Trim39Q9ESN2 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC11.71□□□□□ -0.53
Trim39Q9ESN2 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trim39Q9ESN2 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC11.71□□□□□ -0.53
Trim39Q9ESN2 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC11.71□□□□□ -0.53
Trim39Q9ESN2 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC11.71□□□□□ -0.53
Trim39Q9ESN2 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC11.71□□□□□ -0.53
Trim39Q9ESN2 Gm27839-201ENSMUST00000184242 106 ntBASIC11.71□□□□□ -0.53
Trim39Q9ESN2 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trim39Q9ESN2 Gm7067-201ENSMUST00000207698 1249 ntBASIC11.71□□□□□ -0.53
Trim39Q9ESN2 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim39Q9ESN2 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Trim39Q9ESN2 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim39Q9ESN2 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim39Q9ESN2 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim39Q9ESN2 Gm8798-201ENSMUST00000211877 1661 ntBASIC11.71□□□□□ -0.54
Trim39Q9ESN2 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Trim39Q9ESN2 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trim39Q9ESN2 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim39Q9ESN2 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC11.7□□□□□ -0.54
Trim39Q9ESN2 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trim39Q9ESN2 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim39Q9ESN2 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim39Q9ESN2 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Trim39Q9ESN2 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim39Q9ESN2 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trim39Q9ESN2 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trim39Q9ESN2 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim39Q9ESN2 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim39Q9ESN2 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim39Q9ESN2 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trim39Q9ESN2 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trim39Q9ESN2 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trim39Q9ESN2 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim39Q9ESN2 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Trim39Q9ESN2 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms