Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rrp8Q9DB85 AC159308.2-201ENSMUST00000213592 2325 ntBASIC12.2□□□□□ -0.46
Rrp8Q9DB85 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Rrp8Q9DB85 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rrp8Q9DB85 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rrp8Q9DB85 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rrp8Q9DB85 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Rrp8Q9DB85 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rrp8Q9DB85 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rrp8Q9DB85 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rrp8Q9DB85 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
Rrp8Q9DB85 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Rrp8Q9DB85 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rrp8Q9DB85 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rrp8Q9DB85 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rrp8Q9DB85 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rrp8Q9DB85 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rrp8Q9DB85 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rrp8Q9DB85 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.19□□□□□ -0.46
Rrp8Q9DB85 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Rrp8Q9DB85 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rrp8Q9DB85 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rrp8Q9DB85 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rrp8Q9DB85 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rrp8Q9DB85 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Rrp8Q9DB85 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rrp8Q9DB85 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.19□□□□□ -0.46
Rrp8Q9DB85 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Rrp8Q9DB85 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rrp8Q9DB85 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rrp8Q9DB85 Gm14058-201ENSMUST00000116082 735 ntBASIC12.19□□□□□ -0.46
Rrp8Q9DB85 Mir7677-201ENSMUST00000184226 67 ntBASIC12.19□□□□□ -0.46
Rrp8Q9DB85 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC12.19□□□□□ -0.46
Rrp8Q9DB85 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC12.19□□□□□ -0.46
Rrp8Q9DB85 Gm18304-201ENSMUST00000189162 546 ntBASIC12.19□□□□□ -0.46
Rrp8Q9DB85 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC12.19□□□□□ -0.46
Rrp8Q9DB85 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC12.19□□□□□ -0.46
Rrp8Q9DB85 Gm5051-201ENSMUST00000204085 485 ntBASIC12.19□□□□□ -0.46
Rrp8Q9DB85 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rrp8Q9DB85 Gm18041-201ENSMUST00000218210 618 ntBASIC12.19□□□□□ -0.46
Rrp8Q9DB85 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC12.19□□□□□ -0.46
Rrp8Q9DB85 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Rrp8Q9DB85 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Rrp8Q9DB85 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rrp8Q9DB85 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rrp8Q9DB85 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rrp8Q9DB85 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rrp8Q9DB85 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rrp8Q9DB85 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rrp8Q9DB85 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Rrp8Q9DB85 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rrp8Q9DB85 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rrp8Q9DB85 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rrp8Q9DB85 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Rrp8Q9DB85 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rrp8Q9DB85 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.18□□□□□ -0.46
Rrp8Q9DB85 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rrp8Q9DB85 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Rrp8Q9DB85 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Rrp8Q9DB85 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rrp8Q9DB85 Gm5525-201ENSMUST00000190438 1312 ntBASIC12.18□□□□□ -0.46
Rrp8Q9DB85 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rrp8Q9DB85 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Rrp8Q9DB85 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rrp8Q9DB85 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rrp8Q9DB85 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rrp8Q9DB85 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rrp8Q9DB85 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rrp8Q9DB85 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rrp8Q9DB85 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rrp8Q9DB85 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC12.18□□□□□ -0.46
Rrp8Q9DB85 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rrp8Q9DB85 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC12.18□□□□□ -0.46
Rrp8Q9DB85 Gm17827-201ENSMUST00000211825 742 ntBASIC12.18□□□□□ -0.46
Rrp8Q9DB85 AC122876.1-201ENSMUST00000217619 825 ntBASIC12.18□□□□□ -0.46
Rrp8Q9DB85 AC125486.1-201ENSMUST00000218701 320 ntBASIC12.18□□□□□ -0.46
Rrp8Q9DB85 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rrp8Q9DB85 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Rrp8Q9DB85 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rrp8Q9DB85 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rrp8Q9DB85 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Rrp8Q9DB85 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.18□□□□□ -0.46
Rrp8Q9DB85 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rrp8Q9DB85 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rrp8Q9DB85 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Rrp8Q9DB85 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rrp8Q9DB85 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rrp8Q9DB85 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rrp8Q9DB85 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rrp8Q9DB85 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
Rrp8Q9DB85 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Rrp8Q9DB85 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rrp8Q9DB85 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rrp8Q9DB85 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.17□□□□□ -0.46
Rrp8Q9DB85 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rrp8Q9DB85 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rrp8Q9DB85 Gm24934-201ENSMUST00000103764 111 ntBASIC12.17□□□□□ -0.46
Rrp8Q9DB85 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rrp8Q9DB85 Gm12165-201ENSMUST00000117047 342 ntBASIC12.17□□□□□ -0.46
Rrp8Q9DB85 Gm13035-201ENSMUST00000117496 342 ntBASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms