Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp4cQ9D7F7 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp4cQ9D7F7 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp4cQ9D7F7 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Chmp4cQ9D7F7 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Chmp4cQ9D7F7 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp4cQ9D7F7 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp4cQ9D7F7 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Chmp4cQ9D7F7 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp4cQ9D7F7 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Chmp4cQ9D7F7 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp4cQ9D7F7 Gm6992-201ENSMUST00000217973 1607 ntBASIC14.88□□□□□ -0.03
Chmp4cQ9D7F7 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp4cQ9D7F7 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Chmp4cQ9D7F7 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC14.88□□□□□ -0.03
Chmp4cQ9D7F7 AC126262.1-201ENSMUST00000221802 1904 ntBASIC14.88□□□□□ -0.03
Chmp4cQ9D7F7 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp4cQ9D7F7 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC14.88□□□□□ -0.03
Chmp4cQ9D7F7 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC14.88□□□□□ -0.03
Chmp4cQ9D7F7 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp4cQ9D7F7 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC14.87□□□□□ -0.03
Chmp4cQ9D7F7 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp4cQ9D7F7 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp4cQ9D7F7 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp4cQ9D7F7 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp4cQ9D7F7 Zfp125-201ENSMUST00000079237 2488 ntBASIC14.87□□□□□ -0.03
Chmp4cQ9D7F7 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp4cQ9D7F7 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp4cQ9D7F7 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC14.87□□□□□ -0.03
Chmp4cQ9D7F7 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp4cQ9D7F7 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp4cQ9D7F7 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp4cQ9D7F7 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Chmp4cQ9D7F7 Gm11478-201ENSMUST00000117851 599 ntBASIC14.87□□□□□ -0.03
Chmp4cQ9D7F7 Gm16177-201ENSMUST00000120728 718 ntBASIC14.87□□□□□ -0.03
Chmp4cQ9D7F7 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp4cQ9D7F7 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp4cQ9D7F7 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Chmp4cQ9D7F7 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Chmp4cQ9D7F7 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp4cQ9D7F7 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp4cQ9D7F7 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp4cQ9D7F7 Gm42943-201ENSMUST00000199676 3242 ntBASIC14.87□□□□□ -0.03
Chmp4cQ9D7F7 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC14.87□□□□□ -0.03
Chmp4cQ9D7F7 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp4cQ9D7F7 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp4cQ9D7F7 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp4cQ9D7F7 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Chmp4cQ9D7F7 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC14.87□□□□□ -0.03
Chmp4cQ9D7F7 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp4cQ9D7F7 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp4cQ9D7F7 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp4cQ9D7F7 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC14.87□□□□□ -0.03
Chmp4cQ9D7F7 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp4cQ9D7F7 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp4cQ9D7F7 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Chmp4cQ9D7F7 Gm36970-201ENSMUST00000193688 1859 ntBASIC14.86□□□□□ -0.03
Chmp4cQ9D7F7 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp4cQ9D7F7 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp4cQ9D7F7 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp4cQ9D7F7 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp4cQ9D7F7 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp4cQ9D7F7 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp4cQ9D7F7 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp4cQ9D7F7 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp4cQ9D7F7 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Chmp4cQ9D7F7 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Chmp4cQ9D7F7 AC154517.2-201ENSMUST00000220829 2458 ntBASIC14.86□□□□□ -0.03
Chmp4cQ9D7F7 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp4cQ9D7F7 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Chmp4cQ9D7F7 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp4cQ9D7F7 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp4cQ9D7F7 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC14.86□□□□□ -0.03
Chmp4cQ9D7F7 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp4cQ9D7F7 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp4cQ9D7F7 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC14.86□□□□□ -0.03
Chmp4cQ9D7F7 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Chmp4cQ9D7F7 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp4cQ9D7F7 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp4cQ9D7F7 Ighv5-13-201ENSMUST00000193550 290 ntBASIC14.86□□□□□ -0.03
Chmp4cQ9D7F7 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC14.86□□□□□ -0.03
Chmp4cQ9D7F7 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC14.86□□□□□ -0.03
Chmp4cQ9D7F7 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp4cQ9D7F7 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp4cQ9D7F7 Gm43823-201ENSMUST00000197391 1808 ntBASIC14.86□□□□□ -0.03
Chmp4cQ9D7F7 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp4cQ9D7F7 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC14.86□□□□□ -0.03
Chmp4cQ9D7F7 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Chmp4cQ9D7F7 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Chmp4cQ9D7F7 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp4cQ9D7F7 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp4cQ9D7F7 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp4cQ9D7F7 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp4cQ9D7F7 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Chmp4cQ9D7F7 Map1b-203ENSMUST00000223725 2669 ntBASIC14.86□□□□□ -0.03
Chmp4cQ9D7F7 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp4cQ9D7F7 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp4cQ9D7F7 Gm7049-201ENSMUST00000223520 1712 ntBASIC14.86□□□□□ -0.03
Chmp4cQ9D7F7 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp4cQ9D7F7 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms