Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Stag1Q9D3E6 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Stag1Q9D3E6 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Stag1Q9D3E6 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Stag1Q9D3E6 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Stag1Q9D3E6 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Stag1Q9D3E6 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Stag1Q9D3E6 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Stag1Q9D3E6 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Stag1Q9D3E6 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Stag1Q9D3E6 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Stag1Q9D3E6 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Stag1Q9D3E6 AC155298.2-201ENSMUST00000225485 6226 ntBASIC14.82□□□□□ -0.04
Stag1Q9D3E6 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Stag1Q9D3E6 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Stag1Q9D3E6 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Stag1Q9D3E6 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Stag1Q9D3E6 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Stag1Q9D3E6 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Stag1Q9D3E6 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Stag1Q9D3E6 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Stag1Q9D3E6 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Stag1Q9D3E6 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Stag1Q9D3E6 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Stag1Q9D3E6 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Stag1Q9D3E6 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Stag1Q9D3E6 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Stag1Q9D3E6 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Stag1Q9D3E6 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Stag1Q9D3E6 Gm24934-201ENSMUST00000103764 111 ntBASIC14.82□□□□□ -0.04
Stag1Q9D3E6 Gm23949-201ENSMUST00000104027 127 ntBASIC14.82□□□□□ -0.04
Stag1Q9D3E6 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Stag1Q9D3E6 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Stag1Q9D3E6 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC14.82□□□□□ -0.04
Stag1Q9D3E6 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC14.82□□□□□ -0.04
Stag1Q9D3E6 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Stag1Q9D3E6 AU022133-201ENSMUST00000200601 873 ntBASIC14.82□□□□□ -0.04
Stag1Q9D3E6 Gm44136-201ENSMUST00000203819 1106 ntBASIC14.82□□□□□ -0.04
Stag1Q9D3E6 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Stag1Q9D3E6 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Stag1Q9D3E6 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC14.82□□□□□ -0.04
Stag1Q9D3E6 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Stag1Q9D3E6 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Stag1Q9D3E6 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Stag1Q9D3E6 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
Stag1Q9D3E6 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Stag1Q9D3E6 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Stag1Q9D3E6 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Stag1Q9D3E6 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Stag1Q9D3E6 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Stag1Q9D3E6 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC14.81□□□□□ -0.04
Stag1Q9D3E6 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC14.81□□□□□ -0.04
Stag1Q9D3E6 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC14.81□□□□□ -0.04
Stag1Q9D3E6 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Stag1Q9D3E6 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Stag1Q9D3E6 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Stag1Q9D3E6 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Stag1Q9D3E6 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Stag1Q9D3E6 Gm43721-201ENSMUST00000199677 2313 ntBASIC14.81□□□□□ -0.04
Stag1Q9D3E6 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Stag1Q9D3E6 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
Stag1Q9D3E6 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Stag1Q9D3E6 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Stag1Q9D3E6 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Stag1Q9D3E6 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Stag1Q9D3E6 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC14.81□□□□□ -0.04
Stag1Q9D3E6 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC14.81□□□□□ -0.04
Stag1Q9D3E6 Gm15711-201ENSMUST00000118889 535 ntBASIC14.81□□□□□ -0.04
Stag1Q9D3E6 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC14.81□□□□□ -0.04
Stag1Q9D3E6 Gm23119-201ENSMUST00000158610 140 ntBASIC14.81□□□□□ -0.04
Stag1Q9D3E6 Gm5616-201ENSMUST00000165252 384 ntBASIC14.81□□□□□ -0.04
Stag1Q9D3E6 Gm20426-201ENSMUST00000173657 440 ntBASIC14.81□□□□□ -0.04
Stag1Q9D3E6 Gm8741-201ENSMUST00000174736 384 ntBASIC14.81□□□□□ -0.04
Stag1Q9D3E6 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Stag1Q9D3E6 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC14.81□□□□□ -0.04
Stag1Q9D3E6 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC14.81□□□□□ -0.04
Stag1Q9D3E6 Gm43947-201ENSMUST00000203019 959 ntBASIC14.81□□□□□ -0.04
Stag1Q9D3E6 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC14.81□□□□□ -0.04
Stag1Q9D3E6 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Stag1Q9D3E6 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Stag1Q9D3E6 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Stag1Q9D3E6 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC14.81□□□□□ -0.04
Stag1Q9D3E6 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Stag1Q9D3E6 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Stag1Q9D3E6 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Stag1Q9D3E6 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Stag1Q9D3E6 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Stag1Q9D3E6 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Stag1Q9D3E6 AC116503.1-201ENSMUST00000215445 2192 ntBASIC14.81□□□□□ -0.04
Stag1Q9D3E6 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Stag1Q9D3E6 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Stag1Q9D3E6 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Stag1Q9D3E6 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Stag1Q9D3E6 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Stag1Q9D3E6 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Stag1Q9D3E6 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Stag1Q9D3E6 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Stag1Q9D3E6 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Stag1Q9D3E6 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Stag1Q9D3E6 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms