Protein–RNA interactions for Protein: Q9D394

Rufy3, Protein RUFY3, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rufy3Q9D394 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rufy3Q9D394 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rufy3Q9D394 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
Rufy3Q9D394 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
Rufy3Q9D394 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rufy3Q9D394 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Rufy3Q9D394 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rufy3Q9D394 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rufy3Q9D394 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rufy3Q9D394 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rufy3Q9D394 Gm45342-201ENSMUST00000210903 1363 ntBASIC14.57□□□□□ -0.08
Rufy3Q9D394 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rufy3Q9D394 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rufy3Q9D394 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rufy3Q9D394 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC14.57□□□□□ -0.08
Rufy3Q9D394 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rufy3Q9D394 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rufy3Q9D394 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rufy3Q9D394 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC14.56□□□□□ -0.08
Rufy3Q9D394 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Rufy3Q9D394 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rufy3Q9D394 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rufy3Q9D394 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC14.56□□□□□ -0.08
Rufy3Q9D394 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
Rufy3Q9D394 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Rufy3Q9D394 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Rufy3Q9D394 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rufy3Q9D394 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rufy3Q9D394 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Rufy3Q9D394 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rufy3Q9D394 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC14.56□□□□□ -0.08
Rufy3Q9D394 Gm11658-201ENSMUST00000120913 1008 ntBASIC14.56□□□□□ -0.08
Rufy3Q9D394 Gm13342-201ENSMUST00000121055 207 ntBASIC14.56□□□□□ -0.08
Rufy3Q9D394 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC14.56□□□□□ -0.08
Rufy3Q9D394 Gm16379-201ENSMUST00000161469 348 ntBASIC14.56□□□□□ -0.08
Rufy3Q9D394 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Rufy3Q9D394 Gm2467-201ENSMUST00000182266 1010 ntBASIC14.56□□□□□ -0.08
Rufy3Q9D394 Gm6981-201ENSMUST00000182467 1008 ntBASIC14.56□□□□□ -0.08
Rufy3Q9D394 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Rufy3Q9D394 Gm8762-201ENSMUST00000193486 339 ntBASIC14.56□□□□□ -0.08
Rufy3Q9D394 Gm5781-201ENSMUST00000219792 443 ntBASIC14.56□□□□□ -0.08
Rufy3Q9D394 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rufy3Q9D394 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC14.56□□□□□ -0.08
Rufy3Q9D394 AC126253.1-201ENSMUST00000227974 824 ntBASIC14.56□□□□□ -0.08
Rufy3Q9D394 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rufy3Q9D394 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
Rufy3Q9D394 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rufy3Q9D394 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rufy3Q9D394 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Rufy3Q9D394 Gm37324-201ENSMUST00000194500 4504 ntBASIC14.56□□□□□ -0.08
Rufy3Q9D394 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rufy3Q9D394 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rufy3Q9D394 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rufy3Q9D394 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rufy3Q9D394 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rufy3Q9D394 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rufy3Q9D394 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rufy3Q9D394 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Rufy3Q9D394 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rufy3Q9D394 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rufy3Q9D394 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rufy3Q9D394 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rufy3Q9D394 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rufy3Q9D394 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rufy3Q9D394 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Rufy3Q9D394 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Rufy3Q9D394 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rufy3Q9D394 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rufy3Q9D394 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rufy3Q9D394 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC14.55□□□□□ -0.08
Rufy3Q9D394 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rufy3Q9D394 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rufy3Q9D394 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Rufy3Q9D394 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC14.55□□□□□ -0.08
Rufy3Q9D394 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Rufy3Q9D394 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rufy3Q9D394 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Rufy3Q9D394 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC14.55□□□□□ -0.08
Rufy3Q9D394 Gm24548-201ENSMUST00000158650 108 ntBASIC14.55□□□□□ -0.08
Rufy3Q9D394 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC14.55□□□□□ -0.08
Rufy3Q9D394 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rufy3Q9D394 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC14.55□□□□□ -0.08
Rufy3Q9D394 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Rufy3Q9D394 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Rufy3Q9D394 Gm45784-201ENSMUST00000188360 142 ntBASIC14.55□□□□□ -0.08
Rufy3Q9D394 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC14.55□□□□□ -0.08
Rufy3Q9D394 Gm42599-201ENSMUST00000201308 469 ntBASIC14.55□□□□□ -0.08
Rufy3Q9D394 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Rufy3Q9D394 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC14.55□□□□□ -0.08
Rufy3Q9D394 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC14.55□□□□□ -0.08
Rufy3Q9D394 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rufy3Q9D394 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rufy3Q9D394 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rufy3Q9D394 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC14.55□□□□□ -0.08
Rufy3Q9D394 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rufy3Q9D394 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rufy3Q9D394 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Rufy3Q9D394 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rufy3Q9D394 Gm44806-201ENSMUST00000205574 2303 ntBASIC14.55□□□□□ -0.08
Rufy3Q9D394 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms