Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snf8Q9CZ28 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snf8Q9CZ28 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Snf8Q9CZ28 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snf8Q9CZ28 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Snf8Q9CZ28 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Snf8Q9CZ28 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snf8Q9CZ28 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snf8Q9CZ28 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snf8Q9CZ28 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Snf8Q9CZ28 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snf8Q9CZ28 Cog3-203ENSMUST00000227473 4197 ntBASIC12.81□□□□□ -0.36
Snf8Q9CZ28 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Snf8Q9CZ28 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Snf8Q9CZ28 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Snf8Q9CZ28 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Snf8Q9CZ28 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Snf8Q9CZ28 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Snf8Q9CZ28 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Snf8Q9CZ28 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Snf8Q9CZ28 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Snf8Q9CZ28 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Snf8Q9CZ28 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Snf8Q9CZ28 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Snf8Q9CZ28 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Snf8Q9CZ28 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Snf8Q9CZ28 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Snf8Q9CZ28 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Snf8Q9CZ28 Gm13369-201ENSMUST00000119442 987 ntBASIC12.8□□□□□ -0.36
Snf8Q9CZ28 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Snf8Q9CZ28 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Snf8Q9CZ28 Gm8810-201ENSMUST00000172895 754 ntBASIC12.8□□□□□ -0.36
Snf8Q9CZ28 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Snf8Q9CZ28 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Snf8Q9CZ28 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.8□□□□□ -0.36
Snf8Q9CZ28 Gm9908-201ENSMUST00000211534 448 ntBASIC12.8□□□□□ -0.36
Snf8Q9CZ28 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.8□□□□□ -0.36
Snf8Q9CZ28 Wdyhv1-206ENSMUST00000227142 786 ntBASIC12.8□□□□□ -0.36
Snf8Q9CZ28 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Snf8Q9CZ28 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Snf8Q9CZ28 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.8□□□□□ -0.36
Snf8Q9CZ28 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Snf8Q9CZ28 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Snf8Q9CZ28 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Snf8Q9CZ28 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Snf8Q9CZ28 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Snf8Q9CZ28 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Snf8Q9CZ28 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Snf8Q9CZ28 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Snf8Q9CZ28 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Snf8Q9CZ28 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Snf8Q9CZ28 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Snf8Q9CZ28 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Snf8Q9CZ28 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Snf8Q9CZ28 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Snf8Q9CZ28 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Snf8Q9CZ28 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Snf8Q9CZ28 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Snf8Q9CZ28 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Snf8Q9CZ28 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Snf8Q9CZ28 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.79□□□□□ -0.36
Snf8Q9CZ28 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.79□□□□□ -0.36
Snf8Q9CZ28 Gm11803-201ENSMUST00000119966 444 ntBASIC12.79□□□□□ -0.36
Snf8Q9CZ28 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.79□□□□□ -0.36
Snf8Q9CZ28 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Snf8Q9CZ28 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Snf8Q9CZ28 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.79□□□□□ -0.36
Snf8Q9CZ28 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.79□□□□□ -0.36
Snf8Q9CZ28 Gm27331-201ENSMUST00000183705 60 ntBASIC12.79□□□□□ -0.36
Snf8Q9CZ28 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Snf8Q9CZ28 Gm6745-201ENSMUST00000199216 526 ntBASIC12.79□□□□□ -0.36
Snf8Q9CZ28 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.79□□□□□ -0.36
Snf8Q9CZ28 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.79□□□□□ -0.36
Snf8Q9CZ28 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.79□□□□□ -0.36
Snf8Q9CZ28 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Snf8Q9CZ28 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Snf8Q9CZ28 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.79□□□□□ -0.36
Snf8Q9CZ28 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Snf8Q9CZ28 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.79□□□□□ -0.36
Snf8Q9CZ28 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Snf8Q9CZ28 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Snf8Q9CZ28 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Snf8Q9CZ28 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Snf8Q9CZ28 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Snf8Q9CZ28 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.79□□□□□ -0.36
Snf8Q9CZ28 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Snf8Q9CZ28 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.79□□□□□ -0.36
Snf8Q9CZ28 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.79□□□□□ -0.36
Snf8Q9CZ28 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.79□□□□□ -0.36
Snf8Q9CZ28 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.79□□□□□ -0.36
Snf8Q9CZ28 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Snf8Q9CZ28 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Snf8Q9CZ28 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Snf8Q9CZ28 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Snf8Q9CZ28 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Snf8Q9CZ28 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Snf8Q9CZ28 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.79□□□□□ -0.36
Snf8Q9CZ28 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Snf8Q9CZ28 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.79□□□□□ -0.36
Snf8Q9CZ28 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 71.3 ms