Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm2467-201ENSMUST00000182266 1010 ntBASIC13.96□□□□□ -0.17
Smc1aQ9CU62 Gm6981-201ENSMUST00000182467 1008 ntBASIC13.96□□□□□ -0.17
Smc1aQ9CU62 Gm37259-201ENSMUST00000193903 849 ntBASIC13.96□□□□□ -0.17
Smc1aQ9CU62 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC13.96□□□□□ -0.17
Smc1aQ9CU62 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC13.96□□□□□ -0.17
Smc1aQ9CU62 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smc1aQ9CU62 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smc1aQ9CU62 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smc1aQ9CU62 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Smc1aQ9CU62 AC123834.1-201ENSMUST00000225346 2043 ntBASIC13.96□□□□□ -0.17
Smc1aQ9CU62 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Smc1aQ9CU62 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smc1aQ9CU62 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Smc1aQ9CU62 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Smc1aQ9CU62 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.18
Smc1aQ9CU62 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Smc1aQ9CU62 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.18
Smc1aQ9CU62 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Smc1aQ9CU62 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Smc1aQ9CU62 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC13.96□□□□□ -0.18
Smc1aQ9CU62 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smc1aQ9CU62 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smc1aQ9CU62 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC13.95□□□□□ -0.18
Smc1aQ9CU62 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smc1aQ9CU62 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smc1aQ9CU62 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smc1aQ9CU62 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smc1aQ9CU62 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smc1aQ9CU62 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smc1aQ9CU62 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.95□□□□□ -0.18
Smc1aQ9CU62 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smc1aQ9CU62 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Smc1aQ9CU62 Gm11591-201ENSMUST00000120063 702 ntBASIC13.95□□□□□ -0.18
Smc1aQ9CU62 Gm13297-201ENSMUST00000120205 934 ntBASIC13.95□□□□□ -0.18
Smc1aQ9CU62 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC13.95□□□□□ -0.18
Smc1aQ9CU62 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smc1aQ9CU62 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Smc1aQ9CU62 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Smc1aQ9CU62 AC132384.14-201ENSMUST00000219346 1147 ntBASIC13.95□□□□□ -0.18
Smc1aQ9CU62 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Smc1aQ9CU62 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC13.95□□□□□ -0.18
Smc1aQ9CU62 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smc1aQ9CU62 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smc1aQ9CU62 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC13.95□□□□□ -0.18
Smc1aQ9CU62 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC13.95□□□□□ -0.18
Smc1aQ9CU62 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Smc1aQ9CU62 Gm44758-201ENSMUST00000206096 2068 ntBASIC13.95□□□□□ -0.18
Smc1aQ9CU62 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smc1aQ9CU62 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smc1aQ9CU62 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
Smc1aQ9CU62 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Smc1aQ9CU62 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smc1aQ9CU62 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smc1aQ9CU62 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.95□□□□□ -0.18
Smc1aQ9CU62 Gm7993-201ENSMUST00000200970 1384 ntBASIC13.95□□□□□ -0.18
Smc1aQ9CU62 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smc1aQ9CU62 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Smc1aQ9CU62 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smc1aQ9CU62 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Smc1aQ9CU62 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smc1aQ9CU62 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smc1aQ9CU62 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smc1aQ9CU62 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smc1aQ9CU62 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.94□□□□□ -0.18
Smc1aQ9CU62 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smc1aQ9CU62 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Smc1aQ9CU62 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smc1aQ9CU62 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Smc1aQ9CU62 Daam2-202ENSMUST00000224595 1926 ntBASIC13.94□□□□□ -0.18
Smc1aQ9CU62 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Smc1aQ9CU62 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smc1aQ9CU62 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smc1aQ9CU62 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smc1aQ9CU62 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Smc1aQ9CU62 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC13.94□□□□□ -0.18
Smc1aQ9CU62 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smc1aQ9CU62 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smc1aQ9CU62 Gm6447-201ENSMUST00000118905 835 ntBASIC13.94□□□□□ -0.18
Smc1aQ9CU62 Gm11637-201ENSMUST00000120601 592 ntBASIC13.94□□□□□ -0.18
Smc1aQ9CU62 Gm16479-201ENSMUST00000121706 932 ntBASIC13.94□□□□□ -0.18
Smc1aQ9CU62 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC13.94□□□□□ -0.18
Smc1aQ9CU62 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Smc1aQ9CU62 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Smc1aQ9CU62 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smc1aQ9CU62 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
Smc1aQ9CU62 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smc1aQ9CU62 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC13.94□□□□□ -0.18
Smc1aQ9CU62 Gm6621-201ENSMUST00000193251 772 ntBASIC13.94□□□□□ -0.18
Smc1aQ9CU62 Gm38158-201ENSMUST00000194617 339 ntBASIC13.94□□□□□ -0.18
Smc1aQ9CU62 Gm45266-201ENSMUST00000210111 2173 ntBASIC13.94□□□□□ -0.18
Smc1aQ9CU62 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC13.94□□□□□ -0.18
Smc1aQ9CU62 Gm18636-201ENSMUST00000218846 1066 ntBASIC13.94□□□□□ -0.18
Smc1aQ9CU62 Gm7046-201ENSMUST00000221351 977 ntBASIC13.94□□□□□ -0.18
Smc1aQ9CU62 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC13.94□□□□□ -0.18
Smc1aQ9CU62 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC13.94□□□□□ -0.18
Smc1aQ9CU62 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Smc1aQ9CU62 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smc1aQ9CU62 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smc1aQ9CU62 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smc1aQ9CU62 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms