Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim34aQ99PP6 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim34aQ99PP6 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim34aQ99PP6 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim34aQ99PP6 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim34aQ99PP6 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim34aQ99PP6 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trim34aQ99PP6 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC15.31■□□□□ 0.04
Trim34aQ99PP6 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim34aQ99PP6 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC15.31■□□□□ 0.04
Trim34aQ99PP6 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC15.31■□□□□ 0.04
Trim34aQ99PP6 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Trim34aQ99PP6 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC15.31■□□□□ 0.04
Trim34aQ99PP6 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC15.31■□□□□ 0.04
Trim34aQ99PP6 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC15.31■□□□□ 0.04
Trim34aQ99PP6 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Trim34aQ99PP6 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC15.31■□□□□ 0.04
Trim34aQ99PP6 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim34aQ99PP6 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim34aQ99PP6 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim34aQ99PP6 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim34aQ99PP6 Gm45643-201ENSMUST00000211364 1484 ntBASIC15.31■□□□□ 0.04
Trim34aQ99PP6 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trim34aQ99PP6 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim34aQ99PP6 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim34aQ99PP6 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trim34aQ99PP6 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim34aQ99PP6 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC15.31■□□□□ 0.04
Trim34aQ99PP6 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim34aQ99PP6 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trim34aQ99PP6 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim34aQ99PP6 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim34aQ99PP6 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim34aQ99PP6 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim34aQ99PP6 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim34aQ99PP6 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim34aQ99PP6 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trim34aQ99PP6 Gm23596-201ENSMUST00000104304 132 ntBASIC15.3■□□□□ 0.04
Trim34aQ99PP6 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trim34aQ99PP6 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim34aQ99PP6 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim34aQ99PP6 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC15.3■□□□□ 0.04
Trim34aQ99PP6 Gm6506-201ENSMUST00000119775 1136 ntBASIC15.3■□□□□ 0.04
Trim34aQ99PP6 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim34aQ99PP6 Gm12196-201ENSMUST00000120954 262 ntBASIC15.3■□□□□ 0.04
Trim34aQ99PP6 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Trim34aQ99PP6 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim34aQ99PP6 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC15.3■□□□□ 0.04
Trim34aQ99PP6 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Trim34aQ99PP6 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Trim34aQ99PP6 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim34aQ99PP6 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC15.3■□□□□ 0.04
Trim34aQ99PP6 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trim34aQ99PP6 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trim34aQ99PP6 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trim34aQ99PP6 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
Trim34aQ99PP6 Gm43184-201ENSMUST00000197247 542 ntBASIC15.3■□□□□ 0.04
Trim34aQ99PP6 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trim34aQ99PP6 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trim34aQ99PP6 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim34aQ99PP6 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Trim34aQ99PP6 AC141438.2-201ENSMUST00000215068 271 ntBASIC15.3■□□□□ 0.04
Trim34aQ99PP6 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC15.3■□□□□ 0.04
Trim34aQ99PP6 AC135114.1-201ENSMUST00000228682 270 ntBASIC15.3■□□□□ 0.04
Trim34aQ99PP6 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim34aQ99PP6 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim34aQ99PP6 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Trim34aQ99PP6 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Trim34aQ99PP6 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim34aQ99PP6 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trim34aQ99PP6 Matn2-206ENSMUST00000228570 2798 ntBASIC15.3■□□□□ 0.04
Trim34aQ99PP6 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim34aQ99PP6 Gm43045-201ENSMUST00000198725 2095 ntBASIC15.29■□□□□ 0.04
Trim34aQ99PP6 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim34aQ99PP6 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim34aQ99PP6 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim34aQ99PP6 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trim34aQ99PP6 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim34aQ99PP6 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC15.29■□□□□ 0.04
Trim34aQ99PP6 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim34aQ99PP6 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim34aQ99PP6 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC15.29■□□□□ 0.04
Trim34aQ99PP6 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC15.29■□□□□ 0.04
Trim34aQ99PP6 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim34aQ99PP6 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim34aQ99PP6 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim34aQ99PP6 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC15.29■□□□□ 0.04
Trim34aQ99PP6 Mir680-2-201ENSMUST00000102163 110 ntBASIC15.29■□□□□ 0.04
Trim34aQ99PP6 Gm23251-201ENSMUST00000103773 110 ntBASIC15.29■□□□□ 0.04
Trim34aQ99PP6 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Trim34aQ99PP6 Gm14760-201ENSMUST00000121831 999 ntBASIC15.29■□□□□ 0.04
Trim34aQ99PP6 H2-Q3-201ENSMUST00000172583 608 ntBASIC15.29■□□□□ 0.04
Trim34aQ99PP6 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trim34aQ99PP6 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim34aQ99PP6 AC153954.1-201ENSMUST00000216959 255 ntBASIC15.29■□□□□ 0.04
Trim34aQ99PP6 CT571245.2-201ENSMUST00000218421 305 ntBASIC15.29■□□□□ 0.04
Trim34aQ99PP6 Olfr1347-205ENSMUST00000220413 964 ntBASIC15.29■□□□□ 0.04
Trim34aQ99PP6 AC093022.5-201ENSMUST00000226841 1079 ntBASIC15.29■□□□□ 0.04
Trim34aQ99PP6 Gm1821-202ENSMUST00000227415 750 ntBASIC15.29■□□□□ 0.04
Trim34aQ99PP6 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms