Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.21□□□□□ -0.45
Trim8Q99PJ2 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim8Q99PJ2 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim8Q99PJ2 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim8Q99PJ2 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim8Q99PJ2 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim8Q99PJ2 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim8Q99PJ2 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim8Q99PJ2 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trim8Q99PJ2 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Trim8Q99PJ2 Gm11918-201ENSMUST00000121660 179 ntBASIC12.21□□□□□ -0.45
Trim8Q99PJ2 Gm16479-201ENSMUST00000121706 932 ntBASIC12.21□□□□□ -0.45
Trim8Q99PJ2 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim8Q99PJ2 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim8Q99PJ2 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trim8Q99PJ2 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.21□□□□□ -0.45
Trim8Q99PJ2 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC12.21□□□□□ -0.45
Trim8Q99PJ2 Gm9630-201ENSMUST00000178304 885 ntBASIC12.21□□□□□ -0.45
Trim8Q99PJ2 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trim8Q99PJ2 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.21□□□□□ -0.45
Trim8Q99PJ2 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim8Q99PJ2 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.21□□□□□ -0.45
Trim8Q99PJ2 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trim8Q99PJ2 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim8Q99PJ2 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim8Q99PJ2 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Trim8Q99PJ2 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim8Q99PJ2 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim8Q99PJ2 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim8Q99PJ2 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim8Q99PJ2 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim8Q99PJ2 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim8Q99PJ2 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trim8Q99PJ2 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trim8Q99PJ2 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.21□□□□□ -0.46
Trim8Q99PJ2 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Trim8Q99PJ2 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim8Q99PJ2 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trim8Q99PJ2 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim8Q99PJ2 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim8Q99PJ2 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim8Q99PJ2 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim8Q99PJ2 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim8Q99PJ2 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim8Q99PJ2 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim8Q99PJ2 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim8Q99PJ2 Gm15163-201ENSMUST00000120749 1302 ntBASIC12.2□□□□□ -0.46
Trim8Q99PJ2 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim8Q99PJ2 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Trim8Q99PJ2 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Trim8Q99PJ2 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Trim8Q99PJ2 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.2□□□□□ -0.46
Trim8Q99PJ2 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12.2□□□□□ -0.46
Trim8Q99PJ2 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.2□□□□□ -0.46
Trim8Q99PJ2 Gm11478-201ENSMUST00000117851 599 ntBASIC12.2□□□□□ -0.46
Trim8Q99PJ2 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.2□□□□□ -0.46
Trim8Q99PJ2 Gm19184-201ENSMUST00000196798 928 ntBASIC12.2□□□□□ -0.46
Trim8Q99PJ2 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.2□□□□□ -0.46
Trim8Q99PJ2 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.2□□□□□ -0.46
Trim8Q99PJ2 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim8Q99PJ2 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.2□□□□□ -0.46
Trim8Q99PJ2 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim8Q99PJ2 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.2□□□□□ -0.46
Trim8Q99PJ2 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.2□□□□□ -0.46
Trim8Q99PJ2 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim8Q99PJ2 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Trim8Q99PJ2 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trim8Q99PJ2 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim8Q99PJ2 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim8Q99PJ2 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim8Q99PJ2 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim8Q99PJ2 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trim8Q99PJ2 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim8Q99PJ2 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim8Q99PJ2 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim8Q99PJ2 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim8Q99PJ2 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim8Q99PJ2 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim8Q99PJ2 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim8Q99PJ2 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim8Q99PJ2 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.2□□□□□ -0.46
Trim8Q99PJ2 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim8Q99PJ2 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trim8Q99PJ2 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trim8Q99PJ2 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim8Q99PJ2 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim8Q99PJ2 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trim8Q99PJ2 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim8Q99PJ2 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim8Q99PJ2 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
Trim8Q99PJ2 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim8Q99PJ2 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim8Q99PJ2 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Trim8Q99PJ2 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim8Q99PJ2 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trim8Q99PJ2 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.19□□□□□ -0.46
Trim8Q99PJ2 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim8Q99PJ2 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim8Q99PJ2 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trim8Q99PJ2 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms